RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 VPS4BO75351 444 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 WDPCPO95876 746 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 TGFB1P01137 390 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 SBK3P0C264 359 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 PCNAP12004 261 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 ZNF10P21506 573 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 GNLYP22749 145 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 CERS1P27544 350 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 TSFMP43897 325 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 HNRNPFP52597 415 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 MTTPP55157 894 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 LIM2P55344 173 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 RAB38P57729 211 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 TLR1Q15399 786 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 LIPJQ5W064 366 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 ZNF793Q6ZN11 406 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 SCUBE1Q8IWY4 988 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 CPAMD8Q8IZJ3 1885 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 RNF175Q8N4F7 328 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 PTGR2Q8N8N7 351 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 EIF1ADQ8N9N8 165 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 HUS1BQ8NHY5 278 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 PHF21BQ96EK2 531 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 KCNC2Q96PR1 638 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 NPAS2Q99743 824 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 IPPKQ9H8X2 491 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 STMN3Q9NZ72 180 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 KCMF1Q9P0J7 381 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 XPR1Q9UBH6 696 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 DAPP1Q9UN19 280 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 VPS4AQ9UN37 437 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 TSC22D4Q9Y3Q8 395 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 MMACHCQ9Y4U1 282 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 ANGPTL3Q9Y5C1 460 aa17.34■□□□□ 0.37
SHKBP1-202ENST00000593764 USP9XQ93008 2570 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 DYTNA2CJ06 578 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 A8MUI8 341 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 TGFBR3LH3BV60 316 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 SH3BGRLO75368 114 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 F10P00742 488 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 EEF1DP29692 281 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 TNFSF10P50591 281 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 SLC26A5P58743 744 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 ARG2P78540 354 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 TMEM35AQ53FP2 167 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 DEPDC1Q5TB30 811 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 LGSNQ5TDP6 509 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 FCRLBQ6BAA4 426 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 L3MBTL4Q8NA19 623 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 NFAM1Q8NET5 270 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 ELP5Q8TE02 316 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 SCYL1Q96KG9 808 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 MRPL57Q9BQC6 102 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 TBCDQ9BTW9 1192 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 RNF32Q9H0A6 362 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 RNF11Q9Y3C5 154 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 COPG1Q9Y678 874 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 LRRK2Q5S007 2527 aa17.33■□□□□ 0.36
SHKBP1-202ENST00000593764 SETXQ7Z333 2677 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 H0YIV9 168 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 STX16-NPEPL1H3BU86 382 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 RTCAO00442 366 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 OR7A17O14581 309 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 STX16O14662 325 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 MAN1A2O60476 641 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 UGDHO60701 494 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 ATP5A1P25705 553 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 SERPINB1P30740 379 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 PIK3CBP42338 1070 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 ZNF33BQ06732 778 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 TGM3Q08188 693 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 ACER2Q5QJU3 275 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 ABHD17BQ5VST6 288 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 KHDRBS2Q5VWX1 349 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 CHSY3Q70JA7 882 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 CYP4X1Q8N118 509 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 ACOT4Q8N9L9 421 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 FAM47BQ8NA70 645 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 SRFBP1Q8NEF9 429 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 OR1N1Q8NGS0 311 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 MTBPQ96DY7 904 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 CMTM7Q96FZ5 175 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 NSUN5Q96P11 429 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 CSF3RQ99062 836 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 MRPL46Q9H2W6 279 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 OR51B5Q9H339 312 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 ACTR8Q9H981 624 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 KCNK13Q9HB14 408 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 ZBTB26Q9HCK0 441 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 DMRT3Q9NQL9 472 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 MAP10Q9P2G4 905 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 FETUBQ9UGM5 382 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 ADGRE2Q9UHX3 823 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 PCTPQ9UKL6 214 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 TMCO1Q9UM00 188 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 PCDHGA11Q9Y5H2 935 aa17.32■□□□□ 0.36
SHKBP1-202ENST00000593764 DOPEY2Q9Y3R5 2298 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 SAGE2PA6NJ88 616 aa17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 SAP18O00422 153 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-202ENST00000593764 SCELO95171 688 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms