RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 FBXO48Q5FWF7 155 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 PRAMEF9Q5VWM5 478 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 CMC1Q7Z7K0 106 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 CRLF3Q8IUI8 442 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 BEST3Q8N1M1 668 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 CA13Q8N1Q1 262 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 SUN3Q8TAQ9 357 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 ELP5Q8TE02 316 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 ESAMQ96AP7 390 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 MS4A6EQ96DS6 147 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 WDR34Q96EX3 536 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 PTCHD1Q96NR3 888 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 CD274Q9NZQ7 290 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 PTBP2Q9UKA9 531 aaKnown RBP12.37□□□□□ -0.43
H3F3B-213ENST00000593254 PCDHGB6Q9Y5F9 930 aa12.37□□□□□ -0.43
H3F3B-213ENST00000593254 TCRBV16S1A1N1A0A5B0 115 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 ESYT3A0FGR9 886 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 LRIT2A6NDA9 550 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 SAGE2PA6NJ88 616 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 ESPNB1AK53 854 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 PSMD12O00232 456 aaPredicted RBP12.36□□□□□ -0.43
H3F3B-213ENST00000593254 ERI3O43414 337 aaKnown RBP12.36□□□□□ -0.43
H3F3B-213ENST00000593254 MAN1A2O60476 641 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 CLEC3AO75596 197 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 MYBL2P10244 700 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 CAPN3P20807 821 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 MAOAP21397 527 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 SSTR2P30874 369 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 GMPRP36959 345 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 KCNC1P48547 511 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 KRTAP10-9P60411 292 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 BTN3A2P78410 334 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 CKAP4Q07065 602 aaKnown RBP12.36□□□□□ -0.43
H3F3B-213ENST00000593254 DLG1Q12959 904 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 TUBA3CQ13748 450 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 E2F2Q14209 437 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 SLMAPQ14BN4 828 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 PDK4Q16654 411 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 TUBA3EQ6PEY2 450 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 RPTNQ6XPR3 784 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 VN1R5Q7Z5H4 357 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 ISCA2Q86U28 154 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 LGI4Q8N135 537 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 SLC5A8Q8N695 610 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 PTCD3Q96EY7 689 aaKnown RBP12.36□□□□□ -0.43
H3F3B-213ENST00000593254 EFCAB11Q9BUY7 163 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 ALG9Q9H6U8 611 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 PRDM9Q9NQV7 894 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 ZDHHC18Q9NUE0 388 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 ABI3Q9P2A4 366 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 SUCOQ9UBS9 1254 aaKnown RBP12.36□□□□□ -0.43
H3F3B-213ENST00000593254 RNF112Q9ULX5 631 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 MMACHCQ9Y4U1 282 aa12.36□□□□□ -0.43
H3F3B-213ENST00000593254 A0A0G2JN53 185 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 ANKDD1BA6NHY2 528 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 FAM227AF5H4B4 570 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 CLGNO14967 610 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 RASAL1O95294 804 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 CRYABP02511 175 aaKnown RBP12.35□□□□□ -0.43
H3F3B-213ENST00000593254 EPORP19235 508 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 TFEBP19484 476 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 CD22P20273 847 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 CRABP2P29373 138 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 HPDP32754 393 aaPredicted RBP12.35□□□□□ -0.43
H3F3B-213ENST00000593254 TAS2R50P59544 299 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 SLC7A5Q01650 507 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 RUNX2Q13950 521 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 DOC2AQ14183 400 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 EFTUD2Q15029 972 aaKnown RBP eCLIP12.35□□□□□ -0.432e-8■■■■■ 30.5
H3F3B-213ENST00000593254 XKR6Q5GH73 641 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 ZNF766Q5HY98 468 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 ADNP2Q6IQ32 1131 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 C8orf74Q6P047 294 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 MTFR2Q6P444 385 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 RAPH1Q70E73 1250 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 SCUBE1Q8IWY4 988 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 SNX31Q8N9S9 440 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 MDS2Q8NDY4 140 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 NFAM1Q8NET5 270 aaPredicted RBP12.35□□□□□ -0.43
H3F3B-213ENST00000593254 OR2L5Q8NG80 312 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 DNAJB8Q8NHS0 232 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 STAG3L4Q8TBR4 150 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 CCT6BQ92526 530 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 EXT2Q93063 718 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 FAR2Q96K12 515 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 QRFPRQ96P65 431 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 SIGLEC12Q96PQ1 595 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 ATOH8Q96SQ7 321 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 LRRC1Q9BTT6 524 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 NPLQ9BXD5 320 aaPredicted RBP12.35□□□□□ -0.43
H3F3B-213ENST00000593254 CD244Q9BZW8 370 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 REXO4Q9GZR2 422 aaKnown RBP12.35□□□□□ -0.43
H3F3B-213ENST00000593254 RHBGQ9H310 441 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 NMRAL1Q9HBL8 299 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 NECTIN3Q9NQS3 549 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 NUDT4Q9NZJ9 180 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 ZNF490Q9ULM2 529 aaPredicted RBP12.35□□□□□ -0.43
H3F3B-213ENST00000593254 ASB1Q9Y576 335 aa12.35□□□□□ -0.43
H3F3B-213ENST00000593254 A0A088AWK7 358 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 TRGV8A0A0C4DH27 118 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms