RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 KLF10Q13118 480 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 SLBPQ14493 270 aaKnown RBP eCLIP11.31□□□□□ -0.6
DDX39A-219ENST00000592927 HERC3Q15034 1050 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 NR6A1Q15406 480 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 MAPRE2Q15555 327 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 TCTE1Q5JU00 501 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 C6orf136Q5SQH8 315 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 ZNF787Q6DD87 383 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 PLD3Q8IV08 490 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 OR2T11Q8NH01 316 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 OR1L3Q8NH93 324 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 WDR20Q8TBZ3 569 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 RERGQ96A58 199 aaPredicted RBP11.31□□□□□ -0.6
DDX39A-219ENST00000592927 THAP11Q96EK4 314 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 CATSPER2Q96P56 530 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 FCRL4Q96PJ5 515 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 TEFMQ96QE5 360 aaKnown RBP11.31□□□□□ -0.6
DDX39A-219ENST00000592927 APMAPQ9HDC9 416 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 NMRK1Q9NWW6 199 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 ARMCX1Q9P291 453 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 TAGLN3Q9UI15 199 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 TMED5Q9Y3A6 229 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 CCL27Q9Y4X3 112 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 PCDHGA3Q9Y5H0 932 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 PTGDR2Q9Y5Y4 395 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 COPG1Q9Y678 874 aaKnown RBP11.31□□□□□ -0.6
DDX39A-219ENST00000592927 ITPR2Q14571 2701 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 C2CD3Q4AC94 2353 aa11.31□□□□□ -0.6
DDX39A-219ENST00000592927 LOC105369274A0A096LPK9 316 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 LOC102723532A0A0G2JNH3 316 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 FEZF1A0PJY2 475 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 H0YGG7 62 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 FOXE1O00358 373 aaPredicted RBP11.3□□□□□ -0.6
DDX39A-219ENST00000592927 NVLO15381 856 aaKnown RBP11.3□□□□□ -0.6
DDX39A-219ENST00000592927 OR1F1O43749 312 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 PEX11AO75192 247 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 EIF2S1P05198 315 aaKnown RBP11.3□□□□□ -0.6
DDX39A-219ENST00000592927 ESRRAP11474 423 aaPredicted RBP11.3□□□□□ -0.6
DDX39A-219ENST00000592927 ACPPP15309 386 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 CD22P20273 847 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 GSTM2P28161 218 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 PIK3CBP42338 1070 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 VSX2P58304 361 aaPredicted RBP11.3□□□□□ -0.6
DDX39A-219ENST00000592927 ARF3P61204 181 aaPredicted RBP11.3□□□□□ -0.6
DDX39A-219ENST00000592927 REEP5Q00765 189 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 RBBP5Q15291 538 aaKnown RBP11.3□□□□□ -0.6
DDX39A-219ENST00000592927 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.3□□□□□ -0.6
DDX39A-219ENST00000592927 TMEM198Q66K66 360 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 FRMPD2BQ6IN97 320 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 SCIMPQ6UWF3 145 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 TMIGD1Q6UXZ0 262 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 TMEM126BQ8IUX1 230 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 FAM9CQ8IZT9 166 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 OR4N4Q8N0Y3 316 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 MFSD9Q8NBP5 474 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 ZNF740Q8NDX6 193 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 OR7G3Q8NG95 312 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 RP9Q8TA86 221 aaKnown RBP11.3□□□□□ -0.6
DDX39A-219ENST00000592927 PMEPA1Q969W9 287 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 CMTM7Q96FZ5 175 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 OR2A5Q96R48 311 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 SARGQ9BW04 601 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 B3GNT4Q9C0J1 378 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 SPRTNQ9H040 489 aaPredicted RBP11.3□□□□□ -0.6
DDX39A-219ENST00000592927 SPNS1Q9H2V7 528 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 PRM3Q9NNZ6 103 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 ARL8BQ9NVJ2 186 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 C1orf109Q9NX04 203 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 ASIC5Q9NY37 505 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 ANAPC2Q9UJX6 822 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 PCDHGA4Q9Y5G9 962 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 B3GALT1Q9Y5Z6 326 aa11.3□□□□□ -0.6
DDX39A-219ENST00000592927 C9orf172C9J069 976 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 PSMD12O00232 456 aaPredicted RBP11.29□□□□□ -0.6
DDX39A-219ENST00000592927 TXNDC9O14530 226 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 ZSCAN9O15535 394 aaPredicted RBP11.29□□□□□ -0.6
DDX39A-219ENST00000592927 LCMT2O60294 686 aaKnown RBP11.29□□□□□ -0.6
DDX39A-219ENST00000592927 SCRG1O75711 98 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 ALDOCP09972 364 aaKnown RBP11.29□□□□□ -0.6
DDX39A-219ENST00000592927 T-ENOLP0DO92 83 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 PIK3R1P27986 724 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 MAPK1P28482 360 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 SLC5A2P31639 672 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 BCL6P41182 706 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 SCTRP47872 440 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 GRM7Q14831 915 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 RPS6KA2Q15349 733 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 AP5B1Q2VPB7 878 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 PDCD4Q53EL6 469 aaKnown RBP11.29□□□□□ -0.6
DDX39A-219ENST00000592927 SGO1Q5FBB7 561 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 WASHC2DQ5SRD0 308 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 PWWP2BQ6NUJ5 590 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 TLDC1Q6P9B6 456 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 ZFAND4Q86XD8 727 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 TREML1Q86YW5 311 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 MIER2Q8N344 545 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 ZNF655Q8N720 491 aaPredicted RBP11.29□□□□□ -0.6
DDX39A-219ENST00000592927 CSNK1A1LQ8N752 337 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 TTC29Q8NA56 475 aaPredicted RBP11.29□□□□□ -0.6
DDX39A-219ENST00000592927 FNDC5Q8NAU1 212 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms