RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 XCR1P46094 333 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 EFNA3P52797 238 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 ARFIP1P53367 373 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 MTTPP55157 894 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 SKP1P63208 163 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 CXADRP78310 365 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 KLC1Q07866 573 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 GALNT1Q10472 559 aaPredicted RBP9.39□□□□□ -0.91
TPM4-216ENST00000592822 COL28A1Q2UY09 1125 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 AP5B1Q2VPB7 878 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 CRTC2Q53ET0 693 aaPredicted RBP9.39□□□□□ -0.91
TPM4-216ENST00000592822 KANK2Q63ZY3 851 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 CLEC6AQ6EIG7 209 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 OR4C11Q6IEV9 310 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 SCIMPQ6UWF3 145 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 CUZD1Q86UP6 607 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 CA13Q8N1Q1 262 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 GOLGA6L1Q8N7Z2 621 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 ACOT4Q8N9L9 421 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 ZSCAN1Q8NBB4 408 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 SRFBP1Q8NEF9 429 aaKnown RBP9.39□□□□□ -0.91
TPM4-216ENST00000592822 PEX11GQ96HA9 241 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 PAIP2Q9BPZ3 127 aaKnown RBP9.39□□□□□ -0.91
TPM4-216ENST00000592822 NPLQ9BXD5 320 aaPredicted RBP9.39□□□□□ -0.91
TPM4-216ENST00000592822 C20orf27Q9GZN8 174 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 ACBD3Q9H3P7 528 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 PRORYQ9H606 182 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 BRF2Q9HAW0 419 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 LANCL2Q9NS86 450 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 C14orf105Q9NVL8 296 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 NKIRAS1Q9NYS0 192 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 SLC12A4Q9UP95 1085 aa9.39□□□□□ -0.91
TPM4-216ENST00000592822 A0A088AWK7 358 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 SERTM1A2A2V5 107 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 CDC14CA4D256 554 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 OR2W5A6NFC9 320 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 TMEM114B3SHH9 223 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 TMEM233B4DJY2 109 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 FAM227AF5H4B4 570 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 EEDO75530 441 aaKnown RBP9.38□□□□□ -0.91
TPM4-216ENST00000592822 CRCPO75575 148 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 LYPLA1O75608 230 aaPredicted RBP9.38□□□□□ -0.91
TPM4-216ENST00000592822 SEMA3DO95025 777 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 UROSP10746 265 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 HSD3B1P14060 373 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 ZNF10P21506 573 aaPredicted RBP9.38□□□□□ -0.91
TPM4-216ENST00000592822 GRK2P25098 689 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 HSD3B2P26439 372 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 OTX2P32243 289 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 SSR2P43308 183 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 TSFMP43897 325 aaKnown RBP9.38□□□□□ -0.91
TPM4-216ENST00000592822 RAP1GDS1P52306 607 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 LIM2P55344 173 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 HMGCS1Q01581 520 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 MC1RQ01726 317 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 ZNF33BQ06732 778 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 TBL3Q12788 808 aaKnown RBP9.38□□□□□ -0.91
TPM4-216ENST00000592822 CDC20Q12834 499 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 CSTF3Q12996 717 aaKnown RBP9.38□□□□□ -0.91
TPM4-216ENST00000592822 SSPNQ14714 243 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 UGT3A2Q3SY77 523 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 PPP1R32Q7Z5V6 425 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 METTL4Q8N3J2 472 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 GBP7Q8N8V2 638 aaPredicted RBP9.38□□□□□ -0.91
TPM4-216ENST00000592822 PPP1R14CQ8TAE6 165 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 AGR3Q8TD06 166 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 TBC1D20Q96BZ9 403 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 OR1F2PQ96R84 312 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 MESP1Q9BRJ9 268 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 CENPKQ9BS16 269 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 CRB3Q9BUF7 120 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 MRPL1Q9BYD6 325 aaKnown RBP9.38□□□□□ -0.91
TPM4-216ENST00000592822 RBCK1Q9BYM8 510 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 ACPTQ9BZG2 426 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 ROGDIQ9GZN7 287 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 DDX31Q9H8H2 851 aaKnown RBP9.38□□□□□ -0.91
TPM4-216ENST00000592822 COPS7BQ9H9Q2 264 aaPredicted RBP9.38□□□□□ -0.91
TPM4-216ENST00000592822 EML4Q9HC35 981 aaKnown RBP9.38□□□□□ -0.91
TPM4-216ENST00000592822 KCMF1Q9P0J7 381 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 ZDHHC2Q9UIJ5 367 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 C3orf18Q9UK00 162 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 TRAF6Q9Y4K3 522 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 HS3ST3B1Q9Y662 390 aa9.38□□□□□ -0.91
TPM4-216ENST00000592822 ATMQ13315 3056 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 A0A0A6YYD5 115 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 IDSB3KWA1 339 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 CYR61O00622 381 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 TMPRSS11DO60235 418 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 B4GALT2O60909 372 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 HSPA4LO95757 839 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 HEXBP07686 556 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 FHP07954 510 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 NEFHP12036 1026 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 RNH1P13489 461 aaKnown RBP9.37□□□□□ -0.91
TPM4-216ENST00000592822 IL10P22301 178 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 MMP11P24347 488 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 SLC1A6P48664 564 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 EMP2P54851 167 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 RAB38P57729 211 aa9.37□□□□□ -0.91
TPM4-216ENST00000592822 ABCE1P61221 599 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms