RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 INAQ16352 499 aa13□□□□□ -0.33
APOC1-208ENST00000592535 HIST2H2ACQ16777 129 aaPredicted RBP13□□□□□ -0.33
APOC1-208ENST00000592535 FAM83EQ2M2I3 478 aa13□□□□□ -0.33
APOC1-208ENST00000592535 HIST2H2AA3Q6FI13 130 aa13□□□□□ -0.33
APOC1-208ENST00000592535 ABHD17CQ6PCB6 329 aa13□□□□□ -0.33
APOC1-208ENST00000592535 TUBA3EQ6PEY2 450 aa13□□□□□ -0.33
APOC1-208ENST00000592535 CCDC91Q7Z6B0 441 aa13□□□□□ -0.33
APOC1-208ENST00000592535 SCUBE1Q8IWY4 988 aa13□□□□□ -0.33
APOC1-208ENST00000592535 SLC5A8Q8N695 610 aa13□□□□□ -0.33
APOC1-208ENST00000592535 FAM47BQ8NA70 645 aa13□□□□□ -0.33
APOC1-208ENST00000592535 NFAM1Q8NET5 270 aaPredicted RBP13□□□□□ -0.33
APOC1-208ENST00000592535 RHEBL1Q8TAI7 183 aa13□□□□□ -0.33
APOC1-208ENST00000592535 SUN3Q8TAQ9 357 aa13□□□□□ -0.33
APOC1-208ENST00000592535 ZNF473Q8WTR7 871 aaKnown RBP13□□□□□ -0.33
APOC1-208ENST00000592535 SIGLEC12Q96PQ1 595 aa13□□□□□ -0.33
APOC1-208ENST00000592535 SERINC2Q96SA4 455 aa13□□□□□ -0.33
APOC1-208ENST00000592535 FMO2Q99518 471 aa13□□□□□ -0.33
APOC1-208ENST00000592535 MS4A8Q9BY19 250 aa13□□□□□ -0.33
APOC1-208ENST00000592535 COPS7BQ9H9Q2 264 aaPredicted RBP13□□□□□ -0.33
APOC1-208ENST00000592535 PRTFDC1Q9NRG1 225 aa13□□□□□ -0.33
APOC1-208ENST00000592535 ANKRD10Q9NXR5 420 aa13□□□□□ -0.33
APOC1-208ENST00000592535 ABI3Q9P2A4 366 aa13□□□□□ -0.33
APOC1-208ENST00000592535 CLDN16Q9Y5I7 305 aa13□□□□□ -0.33
APOC1-208ENST00000592535 USP9YO00507 2555 aaPredicted RBP13□□□□□ -0.33
APOC1-208ENST00000592535 SPTAN1Q13813 2472 aaKnown RBP12.99□□□□□ -0.33
APOC1-208ENST00000592535 SPTBN1Q01082 2364 aaKnown RBP12.99□□□□□ -0.33
APOC1-208ENST00000592535 GABRR3A8MPY1 467 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 SYCE1LA8MT33 242 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 TGFBR3LH3BV60 316 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 SH3BGRLO75368 114 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 KLHL2O95198 593 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 RASAL1O95294 804 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 LDLRP01130 860 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 PCNAP12004 261 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 HPDP32754 393 aaPredicted RBP12.99□□□□□ -0.33
APOC1-208ENST00000592535 CD96P40200 585 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 TDGF1P3P51864 188 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 MTTPP55157 894 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 LIM2P55344 173 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 PMP22Q01453 160 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 SETDB1Q15047 1291 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 ACAP2Q15057 778 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 ZNF766Q5HY98 468 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 MED27Q6P2C8 311 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 UBE3DQ7Z6J8 389 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 LAS2Q8IYD9 372 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 PLD6Q8N2A8 252 aaKnown RBP12.99□□□□□ -0.33
APOC1-208ENST00000592535 TEX9Q8N6V9 391 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 MDS2Q8NDY4 140 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 ARMC2Q8NEN0 867 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 SLC44A1Q8WWI5 657 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 NR4A3Q92570 626 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 GPR78Q96P69 363 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 CSF3RQ99062 836 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 UTP23Q9BRU9 249 aaKnown RBP12.99□□□□□ -0.33
APOC1-208ENST00000592535 HES7Q9BYE0 225 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 VPS11Q9H270 941 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 CDCP1Q9H5V8 836 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 PRM3Q9NNZ6 103 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 PRDM7Q9NQW5 492 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 DAPP1Q9UN19 280 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 OSGIN2Q9Y236 505 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 SLC5A6Q9Y289 635 aa12.99□□□□□ -0.33
APOC1-208ENST00000592535 LRRC14BA6NHZ5 514 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 RTCAO00442 366 aaKnown RBP12.98□□□□□ -0.33
APOC1-208ENST00000592535 CYR61O00622 381 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 KLK8O60259 260 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 DDAH2O95865 285 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 TGFB1P01137 390 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 INHBAP08476 426 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 MYBL2P10244 700 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 GFAPP14136 432 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 EPB42P16452 691 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 PPP2R1BP30154 601 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 HSD17B7P56937 341 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 PCDH1Q08174 1060 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 TGM3Q08188 693 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 NAA30Q147X3 362 aaPredicted RBP12.98□□□□□ -0.33
APOC1-208ENST00000592535 OR1C1Q15619 314 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 PFKFB4Q16877 469 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 GLE1Q53GS7 698 aaKnown RBP12.98□□□□□ -0.33
APOC1-208ENST00000592535 HIST2H2BCQ6DN03 193 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 GRHL2Q6ISB3 625 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 ZNF793Q6ZN11 406 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 CLNKQ7Z7G1 428 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 RPS19BP1Q86WX3 136 aaKnown RBP12.98□□□□□ -0.33
APOC1-208ENST00000592535 LGI4Q8N135 537 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 RNF175Q8N4F7 328 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 OR7G3Q8NG95 312 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 UHMK1Q8TAS1 419 aaKnown RBP12.98□□□□□ -0.33
APOC1-208ENST00000592535 ADAMTS18Q8TE60 1221 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 UBE2E3Q969T4 207 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 C5orf34Q96MH7 638 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 PAFAH2Q99487 392 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 TSPYL1Q9H0U9 437 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 PNO1Q9NRX1 252 aaKnown RBP12.98□□□□□ -0.33
APOC1-208ENST00000592535 ZNF358Q9NW07 568 aa12.98□□□□□ -0.33
APOC1-208ENST00000592535 CPSF2Q9P2I0 782 aaKnown RBP12.98□□□□□ -0.33
APOC1-208ENST00000592535 PLEKHB1Q9UF11 243 aaPredicted RBP12.98□□□□□ -0.33
APOC1-208ENST00000592535 ANGPTL3Q9Y5C1 460 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms