RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 AICDAQ9GZX7 198 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 PRTFDC1Q9NRG1 225 aa17.61■□□□□ 0.41
CCDC43-205ENST00000592333 RYDENQ9NUL5 291 aaKnown RBP17.61■□□□□ 0.41
CCDC43-205ENST00000592333 YARS2Q9Y2Z4 477 aaKnown RBP17.61■□□□□ 0.41
CCDC43-205ENST00000592333 C4orf51C9J302 202 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 CLGNO14967 610 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 ERI3O43414 337 aaKnown RBP17.6■□□□□ 0.41
CCDC43-205ENST00000592333 GSTA2P09210 222 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 GNG11P61952 73 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 RUNX2Q13950 521 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 SLBPQ14493 270 aaKnown RBP eCLIP17.6■□□□□ 0.41
CCDC43-205ENST00000592333 CHERPQ8IWX8 916 aaKnown RBP17.6■□□□□ 0.41
CCDC43-205ENST00000592333 TMEM132CQ8N3T6 1108 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 TMEM156Q8N614 296 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 ZFP62Q8NB50 900 aaPredicted RBP17.6■□□□□ 0.41
CCDC43-205ENST00000592333 PYROXD1Q8WU10 500 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 KIAA1191Q96A73 305 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 MTFMTQ96DP5 389 aaKnown RBP17.6■□□□□ 0.41
CCDC43-205ENST00000592333 PTCD3Q96EY7 689 aaKnown RBP17.6■□□□□ 0.41
CCDC43-205ENST00000592333 PDLIM2Q96JY6 352 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 QRFPRQ96P65 431 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 CPNE1Q99829 537 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 REXO4Q9GZR2 422 aaKnown RBP17.6■□□□□ 0.41
CCDC43-205ENST00000592333 RHBGQ9H310 441 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 KCNF1Q9H3M0 494 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 GRPEL1Q9HAV7 217 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 ADAP2Q9NPF8 381 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 DNAJC11Q9NVH1 559 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 TXNDC16Q9P2K2 825 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 ASB1Q9Y576 335 aa17.6■□□□□ 0.41
CCDC43-205ENST00000592333 CSMD1Q96PZ7 3565 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 TRBV11-1A0A0K0K1C0 115 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 ITGA10O75578 1167 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 STK16O75716 305 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 ZFAND5O76080 213 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 MYO1DO94832 1006 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 HNRNPH1P31943 449 aaKnown RBP17.59■□□□□ 0.41
CCDC43-205ENST00000592333 GDF5P43026 501 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 RPL21P46778 160 aaKnown RBP17.59■□□□□ 0.41
CCDC43-205ENST00000592333 MTTPP55157 894 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 CALCOCO2Q13137 446 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 SLC13A2Q13183 592 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 E2F2Q14209 437 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 ZNF460Q14592 562 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 FASTKD3Q14CZ7 662 aaKnown RBP17.59■□□□□ 0.41
CCDC43-205ENST00000592333 ELAVL1Q15717 326 aaKnown RBP17.59■□□□□ 0.41
CCDC43-205ENST00000592333 TBCCQ15814 346 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 PAGE2BQ5JRK9 111 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 DOLPP1Q86YN1 238 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 GPSM1Q86YR5 675 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 CPSF7Q8N684 471 aaKnown RBP17.59■□□□□ 0.41
CCDC43-205ENST00000592333 DAZLQ92904 295 aaKnown RBP17.59■□□□□ 0.41
CCDC43-205ENST00000592333 DMRTA2Q96SC8 542 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 PHACTR1Q9C0D0 580 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 TSPAN10Q9H1Z9 355 aaPredicted RBP17.59■□□□□ 0.41
CCDC43-205ENST00000592333 TIMMDC1Q9NPL8 285 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 WHRNQ9P202 907 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 DAPP1Q9UN19 280 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 CLDN16Q9Y5I7 305 aa17.59■□□□□ 0.41
CCDC43-205ENST00000592333 FAM187AA6NFU0 413 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 PEX1O43933 1283 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 CTNSO60931 367 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 STMN1P16949 149 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 CASP2P42575 452 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 SSR4P51571 173 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 PCDH1Q08174 1060 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 HIST2H2ACQ16777 129 aaPredicted RBP17.58■□□□□ 0.4
CCDC43-205ENST00000592333 RNFT1Q5M7Z0 435 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 HIST2H2AA3Q6FI13 130 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 ABHD17CQ6PCB6 329 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 RGS9BPQ6ZS82 235 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 MAATS1Q7Z4T9 603 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 SULF2Q8IWU5 870 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 CYP4Z2PQ8N1L4 340 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 PDPRQ8NCN5 879 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 MORN4Q8NDC4 146 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 OR8K3Q8NH51 312 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 AGAP11Q8TF27 550 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 UBXN10Q96LJ8 280 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 PHF12Q96QT6 1004 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 GPR22Q99680 433 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 SPOCK3Q9BQ16 436 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 TRIM31Q9BZY9 425 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 LYRM4Q9HD34 91 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 PLSCR2Q9NRY7 297 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 WWOXQ9NZC7 414 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 VTI1BQ9UEU0 232 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 FBXW2Q9UKT8 454 aa17.58■□□□□ 0.4
CCDC43-205ENST00000592333 PCNX1Q96RV3 2341 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 A8MUA0 341 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 CYR61O00622 381 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 TFECO14948 347 aaPredicted RBP17.57■□□□□ 0.4
CCDC43-205ENST00000592333 TAPBPO15533 448 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 TBX6O95947 436 aaPredicted RBP17.57■□□□□ 0.4
CCDC43-205ENST00000592333 TUBB4AP04350 444 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 CCDC166P0CW27 439 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 CD1DP15813 335 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 SERPINB1P30740 379 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 SSTR2P30874 369 aa17.57■□□□□ 0.4
CCDC43-205ENST00000592333 GP5P40197 560 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms