RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 ABI3Q9P2A4 366 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 MMACHCQ9Y4U1 282 aa14.25□□□□□ -0.13
ERCC1-213ENST00000592023 A0A087WUV0 522 aaPredicted RBP14.24□□□□□ -0.13
ERCC1-213ENST00000592023 BLACEA4D250 179 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 SAGE2PA6NJ88 616 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 RTCAO00442 366 aaKnown RBP14.24□□□□□ -0.13
ERCC1-213ENST00000592023 MAN1A2O60476 641 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 SEMA7AO75326 666 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 CBX6O95503 412 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 RHOXF2BP0C7M4 288 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 MAGEA12P43365 314 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 HNRNPFP52597 415 aaKnown RBP14.24□□□□□ -0.13
ERCC1-213ENST00000592023 ALDH18A1P54886 795 aaKnown RBP14.24□□□□□ -0.13
ERCC1-213ENST00000592023 TAS2R50P59544 299 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 TGM3Q08188 693 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 E2F2Q14209 437 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 MEP1AQ16819 746 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 RPUSD3Q6P087 351 aaKnown RBP14.24□□□□□ -0.13
ERCC1-213ENST00000592023 SCUBE1Q8IWY4 988 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 LAS2Q8IYD9 372 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 SLC5A8Q8N695 610 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 TMEM52Q8NDY8 209 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 SUN3Q8TAQ9 357 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 ADAMTS18Q8TE60 1221 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 ZNF473Q8WTR7 871 aaKnown RBP14.24□□□□□ -0.13
ERCC1-213ENST00000592023 DCAKDQ8WVC6 231 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 UBE2E3Q969T4 207 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 ISL2Q96A47 359 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 SCYL1Q96KG9 808 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 BARD1Q99728 777 aaKnown RBP14.24□□□□□ -0.13
ERCC1-213ENST00000592023 NPAS2Q99743 824 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 RHOXF2Q9BQY4 288 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 ANKRD10Q9NXR5 420 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 XPR1Q9UBH6 696 aa14.24□□□□□ -0.13
ERCC1-213ENST00000592023 EXOC1LA0A1B0GW35 172 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 CCDC189A1A4V9 331 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 TRIM49D1C9J1S8 452 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 TGFBR3LH3BV60 316 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 SAP18O00422 153 aaKnown RBP14.23□□□□□ -0.13
ERCC1-213ENST00000592023 KLK8O60259 260 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 PRAMEF2O60811 474 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 KRT38O76015 456 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 SIX3O95343 332 aaPredicted RBP14.23□□□□□ -0.13
ERCC1-213ENST00000592023 TGFB1P01137 390 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 PPP2R1BP30154 601 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 CASP2P42575 452 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 LIM2P55344 173 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 SLC13A2Q13183 592 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 INAQ16352 499 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 H3F3CQ6NXT2 135 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 ZNF793Q6ZN11 406 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 GOLGA7Q7Z5G4 137 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 CLNKQ7Z7G1 428 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 IFT20Q8IY31 132 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 RNF175Q8N4F7 328 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 BCORP1Q8N888 145 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 PTGR2Q8N8N7 351 aaPredicted RBP14.23□□□□□ -0.13
ERCC1-213ENST00000592023 ST6GALNAC3Q8NDV1 305 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 OR7G3Q8NG95 312 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 FAR1Q8WVX9 515 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 KCNC2Q96PR1 638 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 TAAR6Q96RI8 345 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 ACTR8Q9H981 624 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 PNO1Q9NRX1 252 aaKnown RBP14.23□□□□□ -0.13
ERCC1-213ENST00000592023 OLAHQ9NV23 265 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 ZNF180Q9UJW8 692 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 DAPP1Q9UN19 280 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 MRPS33Q9Y291 106 aaKnown RBP14.23□□□□□ -0.13
ERCC1-213ENST00000592023 DOPEY2Q9Y3R5 2298 aa14.23□□□□□ -0.13
ERCC1-213ENST00000592023 ASH1LQ9NR48 2969 aaKnown RBP14.23□□□□□ -0.13
ERCC1-213ENST00000592023 GABRR3A8MPY1 467 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 CLDN4O14493 209 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 MYO1DO94832 1006 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 RNF224P0DH78 156 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 CNTFP26441 200 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 EEF1DP29692 281 aaKnown RBP14.22□□□□□ -0.13
ERCC1-213ENST00000592023 SERPINB1P30740 379 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 ARL1P40616 181 aaPredicted RBP14.22□□□□□ -0.13
ERCC1-213ENST00000592023 SSR2P43308 183 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 HSD17B7P56937 341 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 TUBA3CQ13748 450 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 GTF2H2Q13888 395 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 PCBP2Q15366 365 aaKnown RBP eCLIP14.22□□□□□ -0.13
ERCC1-213ENST00000592023 TSNAXIP1Q2TAA8 658 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 GTF2H2CQ6P1K8 395 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 TUBA3EQ6PEY2 450 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 UBE3DQ7Z6J8 389 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 ZNF595Q8IYB9 648 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 GSPT2Q8IYD1 628 aaKnown RBP14.22□□□□□ -0.13
ERCC1-213ENST00000592023 LRRN4CLQ8ND94 238 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 SRFBP1Q8NEF9 429 aaKnown RBP14.22□□□□□ -0.13
ERCC1-213ENST00000592023 NFAM1Q8NET5 270 aaPredicted RBP14.22□□□□□ -0.13
ERCC1-213ENST00000592023 HUS1BQ8NHY5 278 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 ELP5Q8TE02 316 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 SSC4DQ8WTU2 575 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 UTP23Q9BRU9 249 aaKnown RBP14.22□□□□□ -0.13
ERCC1-213ENST00000592023 SORBS1Q9BX66 1292 aaKnown RBP14.22□□□□□ -0.13
ERCC1-213ENST00000592023 ROGDIQ9GZN7 287 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 CDCP1Q9H5V8 836 aa14.22□□□□□ -0.13
ERCC1-213ENST00000592023 PRDM7Q9NQW5 492 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms