RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 NAPGQ99747 312 aaPredicted RBP16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 PITHD1Q9GZP4 211 aaPredicted RBP16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 DERL2Q9GZP9 239 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 NT5DC2Q9H857 520 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 GRPEL1Q9HAV7 217 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 WWOXQ9NZC7 414 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 GPRC5BQ9NZH0 403 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 TXNDC16Q9P2K2 825 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 SNX24Q9Y343 169 aa16.75■□□□□ 0.27
PRKCSH-211ENST00000590098 TFECO14948 347 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 CLGNO14967 610 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 TP73O15350 636 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 ZNHIT1O43257 154 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 CLEC3AO75596 197 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 HNRNPH1P31943 449 aaKnown RBP16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 RPL21P46778 160 aaKnown RBP16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 MEOX1P50221 254 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 PLA2G16P53816 162 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 RAB38P57729 211 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 TRIM40Q6P9F5 258 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 DOLPP1Q86YN1 238 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 GPSM1Q86YR5 675 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 SCUBE1Q8IWY4 988 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 CYP4Z2PQ8N1L4 340 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 OR2L5Q8NG80 312 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 CDKL2Q92772 493 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 MTFMTQ96DP5 389 aaKnown RBP16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 KRT12Q99456 494 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 REXO4Q9GZR2 422 aaKnown RBP16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 DNAJC11Q9NVH1 559 aa16.74■□□□□ 0.27
PRKCSH-211ENST00000590098 SYNDIG1LA6NDD5 238 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 USP27XA6NNY8 438 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 PEX1O43933 1283 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 ITGA10O75578 1167 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 PIAS1O75925 651 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 ZFAND5O76080 213 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 CCDC166P0CW27 439 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 RCN2Q14257 317 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 CDSNQ15517 529 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 CDKL4Q5MAI5 379 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 SULF2Q8IWU5 870 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 ZNF595Q8IYB9 648 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 SPATA6LQ8N4H0 392 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 SNX31Q8N9S9 440 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 FAM47BQ8NA70 645 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 NCLNQ969V3 563 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 PHF12Q96QT6 1004 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 SERINC2Q96SA4 455 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 MCMBPQ9BTE3 642 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 EHD1Q9H4M9 534 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 COPS7BQ9H9Q2 264 aaPredicted RBP16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 CAB39LQ9H9S4 337 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 PRM3Q9NNZ6 103 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 RNF14Q9UBS8 474 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 MTO1Q9Y2Z2 717 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 ASB1Q9Y576 335 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 ADGRG4Q8IZF6 3080 aa16.73■□□□□ 0.27
PRKCSH-211ENST00000590098 E9PLN8 166 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 TAPBPO15533 448 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 POU3F2P20265 443 aaPredicted RBP16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 PPP2R1BP30154 601 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 PTGER1P34995 402 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 PTGS2P35354 604 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 GGT5P36269 586 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 RFC3P40938 356 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 SSR4P51571 173 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 ATP6V0D1P61421 351 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 TGM3Q08188 693 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 CALCOCO2Q13137 446 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 CBLBQ13191 982 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 BMPR2Q13873 1038 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 XKR6Q5GH73 641 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 SULT1C3Q6IMI6 304 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 C3P1Q6ZMU1 363 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 TMEM132CQ8N3T6 1108 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 PHF10Q8WUB8 498 aaKnown RBP16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 PTCD3Q96EY7 689 aaKnown RBP16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 QRFPRQ96P65 431 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 VKORC1Q9BQB6 163 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 TMEM79Q9BSE2 394 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 SAYSD1Q9NPB0 183 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 ADAP2Q9NPF8 381 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 TIMMDC1Q9NPL8 285 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 SMYD2Q9NRG4 433 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 PPIEQ9UNP9 301 aaKnown RBP16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 ERVK-11Q9UQG0 969 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 YARS2Q9Y2Z4 477 aaKnown RBP16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 CLCA3PQ9Y6N3 262 aa16.72■□□□□ 0.27
PRKCSH-211ENST00000590098 POLQO75417 2590 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 PHGDHO43175 533 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 CDC40O60508 579 aaKnown RBP eCLIP16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 STK16O75716 305 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 S100BP04271 92 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 IFNA16P05015 189 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 STMN1P16949 149 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 TFEBP19484 476 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 SSTR1P30872 391 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 HSPA7P48741 367 aa16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 HNRNPFP52597 415 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-211ENST00000590098 MTTPP55157 894 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms