RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 LSM1O15116 133 aaKnown RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 GPR42O15529 346 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 SKAP2O75563 359 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 SLC22A3O75751 556 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 SOX30O94993 753 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 BMP10O95393 424 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 PDYNP01213 254 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 PRR35P0CG20 571 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 TSPAN8P19075 237 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 CALB2P22676 271 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 CD1CP29017 333 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 EPHA3P29320 983 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 PPP2R1BP30154 601 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 CSTF2P33240 577 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 KCNK10P57789 538 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 C21orf58P58505 322 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 DDX39BQ13838 428 aaKnown RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 FAM53BQ14153 422 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 SPIDRQ14159 915 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 IL11RAQ14626 422 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 SLC9A5Q14940 896 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 ABRAXAS2Q15018 415 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 TCEA2Q15560 299 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 LPAL2Q16609 132 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 MUM1Q2TAK8 710 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 C18orf21Q32NC0 220 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 LSM12Q3MHD2 195 aaKnown RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 SPATS1Q496A3 300 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 SGO1Q5FBB7 561 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 CATSPEREQ5SY80 951 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 ANXA8L1Q5VT79 327 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 KIAA1614Q5VZ46 1190 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 CYP20A1Q6UW02 462 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 RNF44Q7L0R7 432 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 CLNKQ7Z7G1 428 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 GLRX5Q86SX6 157 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 MTDHQ86UE4 582 aaKnown RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 NUDT13Q86X67 352 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 MCATQ8IVS2 390 aaKnown RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 TTC29Q8NA56 475 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 OR2L5Q8NG80 312 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 RFWD2Q8NHY2 731 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 RP9Q8TA86 221 aaKnown RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 IFI44Q8TCB0 444 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 KLHL6Q8WZ60 621 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 ZNF764Q96H86 408 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 TGM7Q96PF1 710 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 TRAPPC9Q96Q05 1148 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 SH3GL1Q99961 368 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 TBC1D10AQ9BXI6 508 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 MRPL1Q9BYD6 325 aaKnown RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 DPY30Q9C005 99 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 B3GNT4Q9C0J1 378 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 REXO4Q9GZR2 422 aaKnown RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 GSX1Q9H4S2 264 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 ZNF768Q9H5H4 540 aaKnown RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 RMND5AQ9H871 391 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 EFCAB1Q9HAE3 211 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 KCNK13Q9HB14 408 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 SDR39U1Q9NRG7 319 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 GID8Q9NWU2 228 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 LYARQ9NX58 379 aaKnown RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 SPHK1Q9NYA1 384 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 EHD3Q9NZN3 535 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 PHF11Q9UIL8 331 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 MCM8Q9UJA3 840 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 MRPS33Q9Y291 106 aaKnown RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 NDUFAF1Q9Y375 327 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 TIMM22Q9Y584 194 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 ASXL3Q9C0F0 2248 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 COL5A1P20908 1838 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 TP53BP1Q12888 1972 aaPredicted RBP6.98□□□□□ -1.29
SMAD4-210ENST00000590061 RP1P56715 2156 aa6.98□□□□□ -1.29
SMAD4-210ENST00000590061 ASCC3Q8N3C0 2202 aaKnown RBP6.97□□□□□ -1.29
SMAD4-210ENST00000590061 TMEM238LA0A1B0GVL6 79 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 FAM234BA2RU67 622 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 MAGEB17A8MXT2 336 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 FCHO1O14526 889 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 CFLARO15519 480 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 NDUFS4O43181 175 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 B3GALT2O43825 422 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 PEX11AO75192 247 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 SLITRK5O94991 958 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 CYC1P08574 325 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 SNRPB2P08579 225 aaKnown RBP6.97□□□□□ -1.29
SMAD4-210ENST00000590061 GIMD1P0DJR0 217 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 NELFEP18615 380 aaKnown RBP6.97□□□□□ -1.29
SMAD4-210ENST00000590061 MAGP20916 626 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 JAK1P23458 1154 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 SERPINB3P29508 390 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 ARRB2P32121 409 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 BUD31P41223 144 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-210ENST00000590061 MAGEA8P43361 318 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 AVPR1BP47901 424 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 MAPK12P53778 367 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 CLDN8P56748 225 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 OR1D5P58170 312 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 TXNL4AP83876 142 aaKnown RBP6.97□□□□□ -1.29
SMAD4-210ENST00000590061 ZNF763Q0D2J5 394 aa6.97□□□□□ -1.29
SMAD4-210ENST00000590061 TCF15Q12870 199 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms