RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 FAM159BA6NKW6 160 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 CXorf49A8MYA2 514 aaPredicted RBP11.41□□□□□ -0.58
VAT1-206ENST00000589709 CLGNO14967 610 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 FANCGO15287 622 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 ERI3O43414 337 aaKnown RBP11.41□□□□□ -0.58
VAT1-206ENST00000589709 B3GALT2O43825 422 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 PRAMEF4O60810 478 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 STK16O75716 305 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 PIAS1O75925 651 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 TBX6O95947 436 aaPredicted RBP11.41□□□□□ -0.58
VAT1-206ENST00000589709 C1QAP02745 245 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 CD1DP15813 335 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 STMN1P16949 149 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 GP5P40197 560 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 ST13P50502 369 aaKnown RBP11.41□□□□□ -0.58
VAT1-206ENST00000589709 GPR143P51810 404 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 RAB38P57729 211 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 E2F2Q14209 437 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 RCN2Q14257 317 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 ZKSCAN8Q15776 578 aaPredicted RBP11.41□□□□□ -0.58
VAT1-206ENST00000589709 TBCCQ15814 346 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 PRAMEF9Q5VWM5 478 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 ABHD17CQ6PCB6 329 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 C3orf62Q6ZUJ4 267 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 VN1R5Q7Z5H4 357 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 ZNF595Q8IYB9 648 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 PDPRQ8NCN5 879 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 SPATA4Q8NEY3 305 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 KIAA1191Q96A73 305 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 TMEM125Q96AQ2 219 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 PTCD3Q96EY7 689 aaKnown RBP11.41□□□□□ -0.58
VAT1-206ENST00000589709 VMP1Q96GC9 406 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 SERINC2Q96SA4 455 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 TMEM79Q9BSE2 394 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 EFCAB11Q9BUY7 163 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 PHACTR1Q9C0D0 580 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 REXO4Q9GZR2 422 aaKnown RBP11.41□□□□□ -0.58
VAT1-206ENST00000589709 CAB39LQ9H9S4 337 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 SAYSD1Q9NPB0 183 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 PRTFDC1Q9NRG1 225 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 WWOXQ9NZC7 414 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 PTBP2Q9UKA9 531 aaKnown RBP11.41□□□□□ -0.58
VAT1-206ENST00000589709 ZNF490Q9ULM2 529 aaPredicted RBP11.41□□□□□ -0.58
VAT1-206ENST00000589709 MRPS33Q9Y291 106 aaKnown RBP11.41□□□□□ -0.58
VAT1-206ENST00000589709 PCNX1Q96RV3 2341 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 APCP25054 2843 aa11.41□□□□□ -0.58
VAT1-206ENST00000589709 NCF1BA6NI72 391 aaPredicted RBP11.4□□□□□ -0.58
VAT1-206ENST00000589709 A8MUA0 341 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 NCF1CA8MVU1 366 aaPredicted RBP11.4□□□□□ -0.58
VAT1-206ENST00000589709 CYR61O00622 381 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 PHGDHO43175 533 aaKnown RBP11.4□□□□□ -0.58
VAT1-206ENST00000589709 CTNSO60931 367 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 MYO1DO94832 1006 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 ESRRAP11474 423 aaPredicted RBP11.4□□□□□ -0.58
VAT1-206ENST00000589709 NCF1P14598 390 aaPredicted RBP11.4□□□□□ -0.58
VAT1-206ENST00000589709 ZNF24P17028 368 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 TFEBP19484 476 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 HTR1EP28566 365 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 CASP2P42575 452 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 HSPA7P48741 367 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 SMSP52788 366 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 MTTPP55157 894 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 RAB10P61026 200 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 MRPS25P82663 173 aaKnown RBP11.4□□□□□ -0.58
VAT1-206ENST00000589709 TGM3Q08188 693 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 LAPTM5Q13571 262 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 DOC2AQ14183 400 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 EFTUD2Q15029 972 aaKnown RBP eCLIP11.4□□□□□ -0.583e-6■■■■■ 41.9
VAT1-206ENST00000589709 OR4D1Q15615 310 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 PAGE2BQ5JRK9 111 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 RNFT1Q5M7Z0 435 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 TRIM40Q6P9F5 258 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 CAPN12Q6ZSI9 719 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 CHERPQ8IWX8 916 aaKnown RBP11.4□□□□□ -0.58
VAT1-206ENST00000589709 GHDCQ8N2G8 530 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 SPATA6LQ8N4H0 392 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 CCT6BQ92526 530 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 UNKQ9C0B0 810 aaKnown RBP11.4□□□□□ -0.58
VAT1-206ENST00000589709 TSPAN10Q9H1Z9 355 aaPredicted RBP11.4□□□□□ -0.58
VAT1-206ENST00000589709 DPH5Q9H2P9 285 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 ADAP2Q9NPF8 381 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 PRDM7Q9NQW5 492 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 GRHL1Q9NZI5 618 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 SH3BGRL2Q9UJC5 107 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 TINAGQ9UJW2 476 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 DAPP1Q9UN19 280 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 KLF13Q9Y2Y9 288 aaPredicted RBP11.4□□□□□ -0.58
VAT1-206ENST00000589709 MEMO1Q9Y316 297 aa11.4□□□□□ -0.58
VAT1-206ENST00000589709 A0A0G2JN53 185 aa11.39□□□□□ -0.59
VAT1-206ENST00000589709 TRBV11-1A0A0K0K1C0 115 aa11.39□□□□□ -0.59
VAT1-206ENST00000589709 KLRC4-KLRK1H3BQV0 150 aa11.39□□□□□ -0.59
VAT1-206ENST00000589709 TGFBR3LH3BV60 316 aa11.39□□□□□ -0.59
VAT1-206ENST00000589709 RAD51CO43502 376 aa11.39□□□□□ -0.59
VAT1-206ENST00000589709 ZFAND5O76080 213 aa11.39□□□□□ -0.59
VAT1-206ENST00000589709 PRF1P14222 555 aa11.39□□□□□ -0.59
VAT1-206ENST00000589709 EPORP19235 508 aa11.39□□□□□ -0.59
VAT1-206ENST00000589709 GRNP28799 593 aaKnown RBP11.39□□□□□ -0.59
VAT1-206ENST00000589709 TNFRSF8P28908 595 aa11.39□□□□□ -0.59
VAT1-206ENST00000589709 CASQ1P31415 396 aa11.39□□□□□ -0.59
VAT1-206ENST00000589709 SPRP35270 261 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms