RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 KIR3DL1P43629 444 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 CORO7P57737 925 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 CCL7P80098 99 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 NFYCQ13952 458 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 UGT8Q16880 541 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 WASHC2DQ5SRD0 308 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 CPTPQ5TA50 214 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 FAM71E1Q6IPT2 247 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 TMEM71Q6P5X7 295 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 ZNF793Q6ZN11 406 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 DBX2Q6ZNG2 339 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 DGLUCYQ7Z3D6 616 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 PRSS42Q7Z5A4 293 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 GPR180Q86V85 440 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 LRRN3Q9H3W5 708 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 SYNDIG1Q9H7V2 258 aa21.15■□□□□ 0.98
ATG4D-209ENST00000588857 TMPRSS11DO60235 418 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 GUCY1B2O75343 617 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 LDOC1O95751 146 aaPredicted RBP21.14■□□□□ 0.98
ATG4D-209ENST00000588857 FAM58BPP0C7Q3 252 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 SEPHS1P49903 392 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 SLAMF1Q13291 335 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 HEPACAMQ14CZ8 416 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 SLC2A7Q6PXP3 512 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 KMT5CQ86Y97 462 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 PGAM4Q8N0Y7 254 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 ZCCHC7Q8N3Z6 543 aaKnown RBP21.14■□□□□ 0.98
ATG4D-209ENST00000588857 AMER3Q8N944 861 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 RHBDD1Q8TEB9 315 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 TM4SF18Q96CE8 201 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 MTERF3Q96E29 417 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 CNDP2Q96KP4 475 aaKnown RBP21.14■□□□□ 0.98
ATG4D-209ENST00000588857 DPYSL5Q9BPU6 564 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 THTPAQ9BU02 230 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 RMND5AQ9H871 391 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 IL1RL2Q9HB29 575 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 MIEF1Q9NQG6 463 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 STARD5Q9NSY2 213 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 ATP6V1HQ9UI12 483 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 CROTQ9UKG9 612 aa21.14■□□□□ 0.98
ATG4D-209ENST00000588857 ATXN7L1Q9ULK2 861 aaPredicted RBP21.14■□□□□ 0.98
ATG4D-209ENST00000588857 GABRR3A8MPY1 467 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 A8MU76 341 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 CDX4O14627 284 aaPredicted RBP21.14■□□□□ 0.97
ATG4D-209ENST00000588857 TOX3O15405 576 aaPredicted RBP21.14■□□□□ 0.97
ATG4D-209ENST00000588857 MTTPP55157 894 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 KLC1Q07866 573 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 SLC14A1Q13336 389 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 PAGE3Q5JUK9 113 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 TMTC4Q5T4D3 741 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 ANKRD26P1Q6NSI1 321 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 TMEM214Q6NUQ4 689 aaKnown RBP21.14■□□□□ 0.97
ATG4D-209ENST00000588857 MSANTD1Q6ZTZ1 278 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 DPP10Q8N608 796 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 OR8J2Q8NGG1 315 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 PPCDCQ96CD2 204 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 MMADHCQ9H3L0 296 aaPredicted RBP21.14■□□□□ 0.97
ATG4D-209ENST00000588857 ATAD3AQ9NVI7 634 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 IRAK4Q9NWZ3 460 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 SH3BP4Q9P0V3 963 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 SEMA5BQ9P283 1151 aa21.14■□□□□ 0.97
ATG4D-209ENST00000588857 COL5A1P20908 1838 aaPredicted RBP21.13■□□□□ 0.97
ATG4D-209ENST00000588857 A0A1W2PQM1 296 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 DCDC2BA2VCK2 349 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 CASC3O15234 703 aaKnown RBP21.13■□□□□ 0.97
ATG4D-209ENST00000588857 NPPAP01160 153 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 FURINP09958 794 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 SMIM10L1P0DMW3 83 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 CKMT2P17540 419 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 ALOX12P18054 663 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 CERS1P27544 350 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 MC1RQ01726 317 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 TRMT5Q32P41 509 aaKnown RBP21.13■□□□□ 0.97
ATG4D-209ENST00000588857 DEFB134Q4QY38 66 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 TCTE1Q5JU00 501 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 OR4F3Q6IEY1 312 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 ERMP1Q7Z2K6 904 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 CAMKMTQ7Z624 323 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 SMIM10Q96HG1 83 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 SERINC2Q96SA4 455 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 HOPXQ9BPY8 73 aaPredicted RBP21.13■□□□□ 0.97
ATG4D-209ENST00000588857 DUSP26Q9BV47 211 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 FAIM2Q9BWQ8 316 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 TMEM9BQ9NQ34 198 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 FAM120CQ9NX05 1096 aaKnown RBP21.13■□□□□ 0.97
ATG4D-209ENST00000588857 FTSJ1Q9UET6 329 aa21.13■□□□□ 0.97
ATG4D-209ENST00000588857 EXO1Q9UQ84 846 aaKnown RBP21.13■□□□□ 0.97
ATG4D-209ENST00000588857 ASCC3Q8N3C0 2202 aaKnown RBP21.12■□□□□ 0.97
ATG4D-209ENST00000588857 C4orf47A7E2U8 309 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 TM4SF5O14894 197 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 SCELO95171 688 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 B3GALT4O96024 378 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 LAMP1P11279 417 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 PIM1P11309 404 aaPredicted RBP21.12■□□□□ 0.97
ATG4D-209ENST00000588857 DDX5P17844 614 aaKnown RBP21.12■□□□□ 0.97
ATG4D-209ENST00000588857 GABRA4P48169 554 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 PSME3P61289 254 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 PDE7AQ13946 482 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 C6orf10Q5SRN2 563 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 D2HGDHQ8N465 521 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms