RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 UTP23Q9BRU9 249 aaKnown RBP18.34■□□□□ 0.53
TPM4-208ENST00000588410 NECTIN3Q9NQS3 549 aa18.34■□□□□ 0.53
TPM4-208ENST00000588410 PRTFDC1Q9NRG1 225 aa18.34■□□□□ 0.53
TPM4-208ENST00000588410 CPSF2Q9P2I0 782 aaKnown RBP18.34■□□□□ 0.53
TPM4-208ENST00000588410 A0A087WUV0 522 aaPredicted RBP18.33■□□□□ 0.52
TPM4-208ENST00000588410 IGKV3D-11A0A0A0MRZ8 115 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 SAGE2PA6NJ88 616 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 POC1B-GALNT4F8VUJ3 575 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 SEMA7AO75326 666 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 MTHFD2P13995 350 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 EDN3P14138 238 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 CERS1P27544 350 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 ECHS1P30084 290 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 ALDH18A1P54886 795 aaKnown RBP18.33■□□□□ 0.52
TPM4-208ENST00000588410 NAA30Q147X3 362 aaPredicted RBP18.33■□□□□ 0.52
TPM4-208ENST00000588410 SETDB1Q15047 1291 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 TMEM35AQ53FP2 167 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 CHSY3Q70JA7 882 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 IFT20Q8IY31 132 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 FAM47BQ8NA70 645 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 UHMK1Q8TAS1 419 aaKnown RBP18.33■□□□□ 0.52
TPM4-208ENST00000588410 KCNC2Q96PR1 638 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 TBCDQ9BTW9 1192 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 ACTR8Q9H981 624 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 ADGRE2Q9UHX3 823 aa18.33■□□□□ 0.52
TPM4-208ENST00000588410 TNPO3Q9Y5L0 923 aaKnown RBP18.33■□□□□ 0.52
TPM4-208ENST00000588410 SPENQ96T58 3664 aaKnown RBP18.33■□□□□ 0.52
TPM4-208ENST00000588410 RASAL1O95294 804 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 TBX6O95947 436 aaPredicted RBP18.32■□□□□ 0.52
TPM4-208ENST00000588410 CNTFP26441 200 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 LIM2P55344 173 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 HSD17B7P56937 341 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 OC90Q02509 493 aaPredicted RBP18.32■□□□□ 0.52
TPM4-208ENST00000588410 PCDH1Q08174 1060 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 E2F2Q14209 437 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 ZNF766Q5HY98 468 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 GRHL2Q6ISB3 625 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 ZNF595Q8IYB9 648 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 LAS2Q8IYD9 372 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 LGI4Q8N135 537 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 OR7G3Q8NG95 312 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 ELP5Q8TE02 316 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 ZNF473Q8WTR7 871 aaKnown RBP18.32■□□□□ 0.52
TPM4-208ENST00000588410 CMTM7Q96FZ5 175 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 SCYL1Q96KG9 808 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 CENPKQ9BS16 269 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 MS4A8Q9BY19 250 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 CDCP1Q9H5V8 836 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 PNO1Q9NRX1 252 aaKnown RBP18.32■□□□□ 0.52
TPM4-208ENST00000588410 NFU1Q9UMS0 254 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 SPACA6W5XKT8 324 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 NUP210LQ5VU65 1888 aa18.32■□□□□ 0.52
TPM4-208ENST00000588410 SYNDIG1LA6NDD5 238 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 GABRR3A8MPY1 467 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 SH3BGRLO75368 114 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 TGFB1P01137 390 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 CRYABP02511 175 aaKnown RBP18.31■□□□□ 0.52
TPM4-208ENST00000588410 RBP1P09455 135 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 PIK3CGP48736 1102 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 PHEXP78562 749 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 TUBA3CQ13748 450 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 DDX39BQ13838 428 aaKnown RBP18.31■□□□□ 0.52
TPM4-208ENST00000588410 PCBP2Q15366 365 aaKnown RBP eCLIP18.31■□□□□ 0.52
TPM4-208ENST00000588410 AP5B1Q2VPB7 878 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 TUBA3EQ6PEY2 450 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 RPS19BP1Q86WX3 136 aaKnown RBP18.31■□□□□ 0.52
TPM4-208ENST00000588410 SCUBE1Q8IWY4 988 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 KIF2BQ8N4N8 673 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 HORMAD2Q8N7B1 307 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 GPR78Q96P69 363 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 DEFB126Q9BYW3 111 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 PRDM7Q9NQW5 492 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 ANKRD10Q9NXR5 420 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 ZNF180Q9UJW8 692 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 DAPP1Q9UN19 280 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 SLC5A6Q9Y289 635 aa18.31■□□□□ 0.52
TPM4-208ENST00000588410 KLK8O60259 260 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 MYO1DO94832 1006 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 DDAH2O95865 285 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 CD96P40200 585 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 ARL1P40616 181 aaPredicted RBP18.3■□□□□ 0.52
TPM4-208ENST00000588410 SSR2P43308 183 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 RAP1GDS1P52306 607 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 GTF2H2Q13888 395 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 OR1C1Q15619 314 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 TSNAXIP1Q2TAA8 658 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 TECRLQ5HYJ1 363 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 LGSNQ5TDP6 509 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 LIPJQ5W064 366 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 GTF2H2CQ6P1K8 395 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 CLNKQ7Z7G1 428 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 DNAJB8Q8NHS0 232 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 ISL2Q96A47 359 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 REPS1Q96D71 796 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 C5orf34Q96MH7 638 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 PSMG3-AS1Q96PY0 264 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 TAAR6Q96RI8 345 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 NPAS2Q99743 824 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 SLX1AQ9BQ83 275 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 LYRM4Q9HD34 91 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms