RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 TSPAN17Q96FV3 270 aa12.45□□□□□ -0.42
PKN1-211ENST00000588200 VMP1Q96GC9 406 aa12.45□□□□□ -0.42
PKN1-211ENST00000588200 FAR2Q96K12 515 aa12.45□□□□□ -0.42
PKN1-211ENST00000588200 UBXN10Q96LJ8 280 aa12.45□□□□□ -0.42
PKN1-211ENST00000588200 DMRTA2Q96SC8 542 aa12.45□□□□□ -0.42
PKN1-211ENST00000588200 EGFL8Q99944 293 aa12.45□□□□□ -0.42
PKN1-211ENST00000588200 SPOCK3Q9BQ16 436 aa12.45□□□□□ -0.42
PKN1-211ENST00000588200 TREX2Q9BQ50 279 aaPredicted RBP12.45□□□□□ -0.42
PKN1-211ENST00000588200 ADAP2Q9NPF8 381 aa12.45□□□□□ -0.42
PKN1-211ENST00000588200 ZNF223Q9UK11 482 aaPredicted RBP12.45□□□□□ -0.42
PKN1-211ENST00000588200 DAPP1Q9UN19 280 aa12.45□□□□□ -0.42
PKN1-211ENST00000588200 NPIPA1Q9UND3 350 aa12.45□□□□□ -0.42
PKN1-211ENST00000588200 MRPS33Q9Y291 106 aaKnown RBP12.45□□□□□ -0.42
PKN1-211ENST00000588200 YARS2Q9Y2Z4 477 aaKnown RBP12.45□□□□□ -0.42
PKN1-211ENST00000588200 TMEM200CA6NKL6 621 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 PRRG2O14669 202 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 TAPBPO15533 448 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 WDR47O94967 919 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 C1QAP02745 245 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 PAFAH1B1P43034 410 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 RPL21P46778 160 aaKnown RBP12.44□□□□□ -0.42
PKN1-211ENST00000588200 BTN3A2P78410 334 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 SRSF11Q05519 484 aaKnown RBP12.44□□□□□ -0.42
PKN1-211ENST00000588200 RCN2Q14257 317 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 ZNF460Q14592 562 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 ZKSCAN8Q15776 578 aaPredicted RBP12.44□□□□□ -0.42
PKN1-211ENST00000588200 SULT1C3Q6IMI6 304 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 ABHD17CQ6PCB6 329 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 FRA10AC1Q70Z53 315 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 FGD2Q7Z6J4 655 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 KLHL7Q8IXQ5 586 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 SRRM1Q8IYB3 904 aaKnown RBP12.44□□□□□ -0.42
PKN1-211ENST00000588200 CYP4X1Q8N118 509 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 CPSF7Q8N684 471 aaKnown RBP12.44□□□□□ -0.42
PKN1-211ENST00000588200 PDPRQ8NCN5 879 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 OR8K3Q8NH51 312 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 MTFMTQ96DP5 389 aaKnown RBP12.44□□□□□ -0.42
PKN1-211ENST00000588200 PDLIM2Q96JY6 352 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 PHF12Q96QT6 1004 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 SERINC2Q96SA4 455 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 GPR22Q99680 433 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 TMEM79Q9BSE2 394 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 EFCAB11Q9BUY7 163 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 TRIM8Q9BZR9 551 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 SMYD2Q9NRG4 433 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 VTI1BQ9UEU0 232 aa12.44□□□□□ -0.42
PKN1-211ENST00000588200 PTBP2Q9UKA9 531 aaKnown RBP12.44□□□□□ -0.42
PKN1-211ENST00000588200 ZNF490Q9ULM2 529 aaPredicted RBP12.44□□□□□ -0.42
PKN1-211ENST00000588200 ANKDD1BA6NHY2 528 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 TGFBR3LH3BV60 316 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 ERI3O43414 337 aaKnown RBP12.43□□□□□ -0.42
PKN1-211ENST00000588200 B3GALT2O43825 422 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 PRAMEF4O60810 478 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 CTNSO60931 367 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 ITGA10O75578 1167 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 ZFAND5O76080 213 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 MYO1DO94832 1006 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 SCELO95171 688 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 GSTA2P09210 222 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 CD1DP15813 335 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 HNF4AP41235 474 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 GDF5P43026 501 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 SLC12A2P55011 1212 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 LAPTM5Q13571 262 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 SLBPQ14493 270 aaKnown RBP eCLIP12.43□□□□□ -0.42
PKN1-211ENST00000588200 EFTUD2Q15029 972 aaKnown RBP eCLIP12.43□□□□□ -0.42
PKN1-211ENST00000588200 ELAVL1Q15717 326 aaKnown RBP12.43□□□□□ -0.42
PKN1-211ENST00000588200 PRAMEF9Q5VWM5 478 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 TRIM40Q6P9F5 258 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 VN1R5Q7Z5H4 357 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 SULF2Q8IWU5 870 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 ZBED8Q8IZ13 594 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 TMEM132CQ8N3T6 1108 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 MORN4Q8NDC4 146 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 SRFBP1Q8NEF9 429 aaKnown RBP12.43□□□□□ -0.42
PKN1-211ENST00000588200 AGAP11Q8TF27 550 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 CDKL2Q92772 493 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 KIAA1191Q96A73 305 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 PTCD3Q96EY7 689 aaKnown RBP12.43□□□□□ -0.42
PKN1-211ENST00000588200 C14orf79Q96F83 325 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 CAPZA3Q96KX2 299 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 RBBP8Q99708 897 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 NAPGQ99747 312 aaPredicted RBP12.43□□□□□ -0.42
PKN1-211ENST00000588200 CPNE1Q99829 537 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 ERP44Q9BS26 406 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 ROGDIQ9GZN7 287 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 REXO4Q9GZR2 422 aaKnown RBP12.43□□□□□ -0.42
PKN1-211ENST00000588200 ENKD1Q9H0I2 346 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 LYRM4Q9HD34 91 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 PRDM7Q9NQW5 492 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 PRTFDC1Q9NRG1 225 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 DNAJC11Q9NVH1 559 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 KCMF1Q9P0J7 381 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 WHRNQ9P202 907 aa12.43□□□□□ -0.42
PKN1-211ENST00000588200 MTO1Q9Y2Z2 717 aaKnown RBP12.43□□□□□ -0.42
PKN1-211ENST00000588200 TRBV11-1A0A0K0K1C0 115 aa12.42□□□□□ -0.42
PKN1-211ENST00000588200 CCDC189A1A4V9 331 aa12.42□□□□□ -0.42
PKN1-211ENST00000588200 FAM187AA6NFU0 413 aa12.42□□□□□ -0.42
PKN1-211ENST00000588200 FAM159BA6NKW6 160 aa12.42□□□□□ -0.42
PKN1-211ENST00000588200 CLGNO14967 610 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms