RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 ITGAMP11215 1152 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 RNH1P13489 461 aaKnown RBP16.75■□□□□ 0.27
ERBB2-221ENST00000584888 EPB42P16452 691 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 BTN3A2P78410 334 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 PAGE2BQ5JRK9 111 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 MFSD4BQ5TF39 518 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 PLAG1Q6DJT9 500 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 ABHD17CQ6PCB6 329 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 QSOX2Q6ZRP7 698 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 UBE3DQ7Z6J8 389 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 LURAP1LQ8IV03 231 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 TMEM151AQ8N4L1 468 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 OR2L5Q8NG80 312 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 ZNF473Q8WTR7 871 aaKnown RBP16.75■□□□□ 0.27
ERBB2-221ENST00000584888 TSLPQ969D9 159 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 MAGEB10Q96LZ2 347 aaPredicted RBP16.75■□□□□ 0.27
ERBB2-221ENST00000584888 RBCK1Q9BYM8 510 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 PRDM7Q9NQW5 492 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 OLAHQ9NV23 265 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 FETUBQ9UGM5 382 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 TSC22D4Q9Y3Q8 395 aa16.75■□□□□ 0.27
ERBB2-221ENST00000584888 DIDO1Q9BTC0 2240 aaKnown RBP16.74■□□□□ 0.27
ERBB2-221ENST00000584888 CACNA1DQ01668 2161 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 IGKV3D-11A0A0A0MRZ8 115 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 EXOC1LA0A1B0GW35 172 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 FAM227AF5H4B4 570 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 ERI3O43414 337 aaKnown RBP16.74■□□□□ 0.27
ERBB2-221ENST00000584888 CDC123O75794 336 aaPredicted RBP16.74■□□□□ 0.27
ERBB2-221ENST00000584888 SEC24DO94855 1032 aaPredicted RBP16.74■□□□□ 0.27
ERBB2-221ENST00000584888 WDPCPO95876 746 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 F10P00742 488 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 UQCRHP07919 91 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 GFAPP14136 432 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 DCTP40126 519 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 BTG2P78543 158 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 SLC29A2Q14542 456 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 ABRAXAS2Q15018 415 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 NSDHLQ15738 373 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 HIST2H2ACQ16777 129 aaPredicted RBP16.74■□□□□ 0.27
ERBB2-221ENST00000584888 TSNAXIP1Q2TAA8 658 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 ZNF324BQ6AW86 544 aaPredicted RBP16.74■□□□□ 0.27
ERBB2-221ENST00000584888 HIST2H2AA3Q6FI13 130 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 GRHL2Q6ISB3 625 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 H3F3CQ6NXT2 135 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 TEX9Q8N6V9 391 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 OR7G3Q8NG95 312 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 TAAR6Q96RI8 345 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 MS4A8Q9BY19 250 aa16.74■□□□□ 0.27
ERBB2-221ENST00000584888 REXO4Q9GZR2 422 aaKnown RBP16.74■□□□□ 0.27
ERBB2-221ENST00000584888 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.74■□□□□ 0.27
ERBB2-221ENST00000584888 NBPF19A0A087WUL8 3843 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 A0A0G2JN53 185 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 B4GALT2O60909 372 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 SIX3O95343 332 aaPredicted RBP16.73■□□□□ 0.27
ERBB2-221ENST00000584888 SBK3P0C264 359 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 JAK1P23458 1154 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 HPDP32754 393 aaPredicted RBP16.73■□□□□ 0.27
ERBB2-221ENST00000584888 AP2B1P63010 937 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 SFT2D3Q587I9 215 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 LIPJQ5W064 366 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 MED27Q6P2C8 311 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 M1APQ8TC57 530 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 CCT6BQ92526 530 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 UBE2E3Q969T4 207 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 FAR2Q96K12 515 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 F2RL3Q96RI0 385 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 RNF32Q9H0A6 362 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 STMN3Q9NZ72 180 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 CPSF2Q9P2I0 782 aaKnown RBP16.73■□□□□ 0.27
ERBB2-221ENST00000584888 TMCO1Q9UM00 188 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 CLDN16Q9Y5I7 305 aa16.73■□□□□ 0.27
ERBB2-221ENST00000584888 TNPO3Q9Y5L0 923 aaKnown RBP16.73■□□□□ 0.27
ERBB2-221ENST00000584888 TEX15Q9BXT5 2789 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 TCRBV16S1A1N1A0A5B0 115 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 STX16-NPEPL1H3BU86 382 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 STX16O14662 325 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 PRMT3O60678 531 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 UGDHO60701 494 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 STSP08842 583 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 TNFRSF8P28908 595 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 SERPINB1P30740 379 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 PLA2G16P53816 162 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 PER3P56645 1201 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 GTF2H2Q13888 395 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 INAQ16352 499 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 LGSNQ5TDP6 509 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 ABHD17BQ5VST6 288 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 GTF2H2CQ6P1K8 395 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 PAPD4Q6PIY7 484 aaKnown RBP16.72■□□□□ 0.27
ERBB2-221ENST00000584888 GOLGA7Q7Z5G4 137 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 GSPT2Q8IYD1 628 aaKnown RBP16.72■□□□□ 0.27
ERBB2-221ENST00000584888 L3MBTL4Q8NA19 623 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 MZB1Q8WU39 189 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 MTBPQ96DY7 904 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 PTCHD1Q96NR3 888 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 SERINC2Q96SA4 455 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 MRPL57Q9BQC6 102 aaKnown RBP16.72■□□□□ 0.27
ERBB2-221ENST00000584888 NECTIN3Q9NQS3 549 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 PRDM9Q9NQV7 894 aa16.72■□□□□ 0.27
ERBB2-221ENST00000584888 KCMF1Q9P0J7 381 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms