RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 CD96P40200 585 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 MSH2P43246 934 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 RAB38P57729 211 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 MEP1AQ16819 746 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 ZNF766Q5HY98 468 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 SPINK14Q6IE38 97 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 ZNF793Q6ZN11 406 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 UBE3DQ7Z6J8 389 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 CLNKQ7Z7G1 428 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 PLD6Q8N2A8 252 aaKnown RBP16.87■□□□□ 0.29
SRSF1-208ENST00000584773 MDS2Q8NDY4 140 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 UHMK1Q8TAS1 419 aaKnown RBP16.87■□□□□ 0.29
SRSF1-208ENST00000584773 UBTD2Q8WUN7 234 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 NR4A3Q92570 626 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 EFCAB11Q9BUY7 163 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 ACSS3Q9H6R3 686 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 ZNF358Q9NW07 568 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 SLC5A6Q9Y289 635 aa16.87■□□□□ 0.29
SRSF1-208ENST00000584773 DOPEY1Q5JWR5 2465 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 A0A087X1B8 175 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 K7EPI3 171 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 SAP18O00422 153 aaKnown RBP16.86■□□□□ 0.29
SRSF1-208ENST00000584773 B3GALT2O43825 422 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 RASAL1O95294 804 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 CLDN1O95832 211 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 LIM2P55344 173 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 OR1C1Q15619 314 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 TRIM40Q6P9F5 258 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 SCUBE1Q8IWY4 988 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 SLC5A8Q8N695 610 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 TEX9Q8N6V9 391 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 SUN3Q8TAQ9 357 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 ZNF473Q8WTR7 871 aaKnown RBP16.86■□□□□ 0.29
SRSF1-208ENST00000584773 SREK1Q8WXA9 508 aaKnown RBP16.86■□□□□ 0.29
SRSF1-208ENST00000584773 GPR78Q96P69 363 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 SORBS1Q9BX66 1292 aaKnown RBP16.86■□□□□ 0.29
SRSF1-208ENST00000584773 MS4A8Q9BY19 250 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 PITHD1Q9GZP4 211 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-208ENST00000584773 CLK4Q9HAZ1 481 aaKnown RBP16.86■□□□□ 0.29
SRSF1-208ENST00000584773 PRM3Q9NNZ6 103 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 PRDM7Q9NQW5 492 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 PRTFDC1Q9NRG1 225 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 PNO1Q9NRX1 252 aaKnown RBP16.86■□□□□ 0.29
SRSF1-208ENST00000584773 OPTCQ9UBM4 332 aa16.86■□□□□ 0.29
SRSF1-208ENST00000584773 MTRF1LQ9UGC7 380 aaKnown RBP16.86■□□□□ 0.29
SRSF1-208ENST00000584773 MYO1DO94832 1006 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 TGFB1P01137 390 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 COL8A1P27658 744 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 GSTM2P28161 218 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 TPP2P29144 1249 aaPredicted RBP16.85■□□□□ 0.29
SRSF1-208ENST00000584773 PHBP35232 272 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 OC90Q02509 493 aaPredicted RBP16.85■□□□□ 0.29
SRSF1-208ENST00000584773 E2F2Q14209 437 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 TBCCQ15814 346 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 INAQ16352 499 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 PFKFB4Q16877 469 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 PAGE2BQ5JRK9 111 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 THAP3Q8WTV1 239 aaPredicted RBP16.85■□□□□ 0.29
SRSF1-208ENST00000584773 C5orf34Q96MH7 638 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 SERINC2Q96SA4 455 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 UTP23Q9BRU9 249 aaKnown RBP16.85■□□□□ 0.29
SRSF1-208ENST00000584773 NPLQ9BXD5 320 aaPredicted RBP16.85■□□□□ 0.29
SRSF1-208ENST00000584773 VPS11Q9H270 941 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 COPS7BQ9H9Q2 264 aaPredicted RBP16.85■□□□□ 0.29
SRSF1-208ENST00000584773 ZNF223Q9UK11 482 aaPredicted RBP16.85■□□□□ 0.29
SRSF1-208ENST00000584773 MMACHCQ9Y4U1 282 aa16.85■□□□□ 0.29
SRSF1-208ENST00000584773 WIPF3A6NGB9 483 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 CYR61O00622 381 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 LRRTM2O43300 516 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 SIX3O95343 332 aaPredicted RBP16.84■□□□□ 0.29
SRSF1-208ENST00000584773 CTAGE8P0CG41 777 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 GFAPP14136 432 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 TYK2P29597 1187 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 CASP2P42575 452 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 SERPINB8P50452 374 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 MTTPP55157 894 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 TAS2R50P59544 299 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 SLC13A2Q13183 592 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 LAPTM5Q13571 262 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 DDX39BQ13838 428 aaKnown RBP16.84■□□□□ 0.29
SRSF1-208ENST00000584773 SETDB1Q15047 1291 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 HIST2H2ACQ16777 129 aaPredicted RBP16.84■□□□□ 0.29
SRSF1-208ENST00000584773 C1QL3Q5VWW1 255 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 HIST2H2AA3Q6FI13 130 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 MED27Q6P2C8 311 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 RPS19BP1Q86WX3 136 aaKnown RBP16.84■□□□□ 0.29
SRSF1-208ENST00000584773 RELL1Q8IUW5 271 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 CTAGE4Q8IX94 777 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 APCDD1LQ8NCL9 501 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 OR7G3Q8NG95 312 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 SLC44A1Q8WWI5 657 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 SEC16BQ96JE7 1060 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 FMO2Q99518 471 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 MAPKAP1Q9BPZ7 522 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 OR51B5Q9H339 312 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 ABI3Q9P2A4 366 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 CPSF2Q9P2I0 782 aaKnown RBP16.84■□□□□ 0.29
SRSF1-208ENST00000584773 DAPP1Q9UN19 280 aa16.84■□□□□ 0.29
SRSF1-208ENST00000584773 TRBV11-1A0A0K0K1C0 115 aa16.83■□□□□ 0.28
SRSF1-208ENST00000584773 PRKNO60260 465 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms