RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	ISG20	Q96AZ6	181 aa	Known RBP	11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	DOK1	Q99704	481 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	NEUROG3	Q9Y4Z2	214 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	HCFC2	Q9Y5Z7	792 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ANKRD36	A6QL64	1941 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063		J3QW42	95 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	TAPBP	O15533	448 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PAPLN	O95428	1278 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CLDN7	O95471	211 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	NADK	O95544	446 aa	Predicted RBP	11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PCSK2	P16519	638 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	GGT1	P19440	569 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	DGKE	P52429	567 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	RHOA	P61586	193 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	TEAD2	Q15562	447 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	C9orf50	Q5SZB4	431 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SBSN	Q6UWP8	590 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ZSWIM9	Q86XI8	627 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	MSRB3	Q8IXL7	192 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SLC13A3	Q8WWT9	602 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	OVCA2	Q8WZ82	227 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	OR52E6	Q96RD3	313 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SUV39H2	Q9H5I1	410 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	MARCH7	Q9H992	704 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	LATS2	Q9NRM7	1088 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	HCN2	Q9UL51	889 aa		11.16	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	LOC100130705	A0A1B0GUX0	176 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CXCR6	O00574	342 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	GAPDHS	O14556	408 aa	Predicted RBP	11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CKMT1A	P12532	417 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ITGAL	P20701	1170 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PDHA2	P29803	388 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	AQP1	P29972	269 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	HPCAL1	P37235	193 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	WNT5A	P41221	380 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CDKN2C	P42773	168 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SLC15A1	P46059	708 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	EMX1	Q04741	257 aa	Predicted RBP	11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SLC13A2	Q13183	592 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	ARHGEF7	Q14155	803 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	DHCR24	Q15392	516 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	NPTX1	Q15818	432 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SYT16	Q17RD7	645 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	GTF2IRD2B	Q6EKJ0	949 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PTRHD1	Q6GMV3	140 aa	Known RBP	11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	CES5A	Q6NT32	575 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	VTCN1	Q7Z7D3	282 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	GTF2IRD2	Q86UP8	949 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SERPINA9	Q86WD7	417 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PROSER1	Q86XN7	944 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	MCOLN3	Q8TDD5	553 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	HTRA1	Q92743	480 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	NODAL	Q96S42	347 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	DPH2	Q9BQC3	489 aa	Predicted RBP	11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	DPY30	Q9C005	99 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	MAGEL2	Q9UJ55	1249 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PKP3	Q9Y446	797 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	PLXNA4	Q9HCM2	1894 aa		11.15	□□□□□ -0.62
CDK5RAP3-231	ENST00000584063	TRAV19	A0A0A6YYK7	116 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	LINC01553	A4QN01	128 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	SLC1A7	O00341	560 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	PRAMEF1	O95521	474 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CPNE6	O95741	557 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	LINC00271	P0C7V0	271 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	TACR1	P25103	407 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	HTRA4	P83105	476 aa	Predicted RBP	11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ADPRM	Q3LIE5	342 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	NCEH1	Q6PIU2	408 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ASPG	Q86U10	573 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	TPRA1	Q86W33	373 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	SLC43A2	Q8N370	569 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ANGPTL6	Q8NI99	470 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	GTF2H4	Q92759	462 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	MSANTD3	Q96H12	275 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CDC6	Q99741	560 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	LINC00597	Q9H2U6	94 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	POPDC3	Q9HBV1	291 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ABCG2	Q9UNQ0	655 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ERGIC3	Q9Y282	383 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	PCDHB14	Q9Y5E9	798 aa		11.15	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063		A0A1W2PPL8	197 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	LOC730098	B7Z3J9	87 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	NEDD8-MDP1	E9PL57	170 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063		M0R3G1	203 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	LEFTY2	O00292	366 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	SULT1C4	O75897	302 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	UMPS	P11172	480 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	DCT	P40126	519 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	GPR3	P46089	330 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CAPZA2	P47755	286 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	GNG10	P50151	68 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	PWP1	Q13610	501 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	CARD16	Q5EG05	197 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	ARL14	Q8N4G2	192 aa		11.14	□□□□□ -0.63
CDK5RAP3-231	ENST00000584063	PAPD5	Q8NDF8	572 aa	Known RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms