RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 CDC7O00311 574 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CLDN4O14493 209 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TP73O15350 636 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CDC40O60508 579 aaKnown RBP eCLIP8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 H2AFYO75367 372 aaKnown RBP8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 ERLIN1O75477 346 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TPOP07202 933 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 SERPINA6P08185 405 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 NCF1P14598 390 aaPredicted RBP8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 MEOX1P50221 254 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 HLCSP50747 726 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 MLF1P58340 268 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 BTN3A2P78410 334 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 HYAL2Q12891 473 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 ILF2Q12905 390 aaKnown RBP8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 SLC13A2Q13183 592 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TERF2Q15554 542 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TSNQ15631 228 aaKnown RBP8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 ZNF468Q5VIY5 522 aaPredicted RBP8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 STEAP4Q687X5 459 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TMIGD1Q6UXZ0 262 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 C3orf62Q6ZUJ4 267 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 ZC3HC1Q86WB0 502 aaKnown RBP8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 SIAH3Q8IW03 269 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CEP97Q8IW35 865 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 KRT78Q8N1N4 520 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TCAIMQ8N3R3 496 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TMEM156Q8N614 296 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 FAM47BQ8NA70 645 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 FBXO36Q8NEA4 188 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CA5BP1Q8WTZ4 195 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 PHF10Q8WUB8 498 aaKnown RBP8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 ANKRD7Q92527 254 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CDKL2Q92772 493 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 WDR83Q9BRX9 315 aaKnown RBP8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CNOT10Q9H9A5 744 aaKnown RBP8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 POPDC3Q9HBV1 291 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 PRTFDC1Q9NRG1 225 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 IKZF3Q9UKT9 509 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 PPT2Q9UMR5 302 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CSMD1Q96PZ7 3565 aa8.14□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CSMD2Q7Z408 3487 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 A8MVJ9 347 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 C4orf51C9J302 202 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 E7ESA3 106 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 E9PLN8 166 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CLGNO14967 610 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 B3GALT2O43825 422 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 HS6ST1O60243 411 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 DNAJB6O75190 326 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 ITGA10O75578 1167 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 S100BP04271 92 aaPredicted RBP8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 GSTA2P09210 222 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 SMIM10L1P0DMW3 83 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 C1GALT1C1LP0DN25 315 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TFEBP19484 476 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 SSTR2P30874 369 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TRHRP34981 398 aaPredicted RBP8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 PTGER1P34995 402 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 PHBP35232 272 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 PTGS2P35354 604 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 SLC6A12P48065 614 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 SSR4P51571 173 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 HSD17B7P56937 341 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 RAB38P57729 211 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TAS2R39P59534 338 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 VSNL1P62760 191 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TGM3Q08188 693 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CBLBQ13191 982 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 RCN2Q14257 317 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 FRG1Q14331 258 aaKnown RBP8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TGFBIQ15582 683 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 C3P1Q6ZMU1 363 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CAPN12Q6ZSI9 719 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 NCCRP1Q6ZVX7 275 aaPredicted RBP8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CD163Q86VB7 1156 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 APCDD1LQ8NCL9 501 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CREB3L4Q8TEY5 395 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CHTF18Q8WVB6 975 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 SDCCAG3Q96C92 435 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TSPAN17Q96FV3 270 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 SMIM10Q96HG1 83 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 SEC16BQ96JE7 1060 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 LURAP1Q96LR2 239 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 VKORC1Q9BQB6 163 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 NPLQ9BXD5 320 aaPredicted RBP8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 CAPS2Q9BXY5 557 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TRIM8Q9BZR9 551 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 PHACTR1Q9C0D0 580 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 REXO4Q9GZR2 422 aaKnown RBP8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 RHOJQ9H4E5 214 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 KLHL31Q9H511 634 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 TRIM45Q9H8W5 580 aaPredicted RBP8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 PLAC1Q9HBJ0 212 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 ADAP2Q9NPF8 381 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 PNO1Q9NRX1 252 aaKnown RBP8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 HPF1Q9NWY4 346 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 GPRC5BQ9NZH0 403 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 ERVK-11Q9UQG0 969 aa8.13□□□□□ -1.11
CDK5RAP3-229ENST00000583697 PSAT1Q9Y617 370 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms