RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 CACNB4O00305 520 aaPredicted RBP4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 CHUKO15111 745 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 KINO60870 393 aaKnown RBP4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 SORBS2O94875 1100 aaKnown RBP4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 TRIM49P0CI25 452 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 TRIM49CP0CI26 452 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 ODC1P11926 461 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 SELEP16581 610 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 ACKR3P25106 362 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 BACE1P56817 501 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 KIAA1024LP59773 190 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 KRTAP27-1Q3LI81 207 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 ELMOD1Q8N336 334 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 SFRP1Q8N474 314 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 CARNMT1Q8N4J0 409 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 Q8NBF4 154 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 CLEC1AQ8NC01 280 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 OR10G7Q8NGN6 311 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 BCL2L2Q92843 193 aaPredicted RBP4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 CABS1Q96KC9 395 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 FNDC4Q9H6D8 234 aaPredicted RBP4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 FAM212BQ9NTI7 297 aaPredicted RBP4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 NDE1Q9NXR1 346 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 ZHX2Q9Y6X8 837 aa4.68□□□□□ -1.66
SMARCE1-219ENST00000583294 GTPBP10A4D1E9 387 aaKnown RBP4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 C5orf51A6NDU8 294 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 A8MU76 341 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 TFECO14948 347 aaPredicted RBP4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 P2RX6O15547 441 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 SYT7O43581 403 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 RTN2O75298 545 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 GAS8O95995 478 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 NUDT17P0C025 328 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 ATP6V1B1P15313 513 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 EDNRAP25101 427 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 LCP2Q13094 533 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 PPP2R5CQ13362 524 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 NFATC2Q13469 925 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 TAF1BQ53T94 588 aaPredicted RBP4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 C2CD6Q53TS8 623 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 ZNF613Q6PF04 617 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 GDPGP1Q6ZNW5 385 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 PRSS42Q7Z5A4 293 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 ZNF444Q8N0Y2 327 aaPredicted RBP4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 SPC24Q8NBT2 197 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 RNASE8Q8TDE3 154 aaKnown RBP4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 GTF3AQ92664 365 aaKnown RBP4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 SNX21Q969T3 373 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 PRICKLE1Q96MT3 831 aaPredicted RBP4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 CCDC43Q96MW1 224 aaKnown RBP4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 DDX50Q9BQ39 737 aaKnown RBP4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 TRIM51Q9BSJ1 452 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 LRRC2Q9BYS8 371 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 RSPH9Q9H1X1 276 aaPredicted RBP4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 KCNK13Q9HB14 408 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 PNPLA3Q9NST1 481 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 ZNF319Q9P2F9 582 aa4.67□□□□□ -1.66
SMARCE1-219ENST00000583294 SERINC4A6NH21 518 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 SRRM4A7MD48 611 aaKnown RBP4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 SOCS3O14543 225 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 DCXO43602 365 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 GMNNO75496 209 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 MTRF1O75570 445 aaKnown RBP4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 NXPH4O95158 308 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 CGAP01215 116 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 CHRNGP07510 517 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 LYNP07948 512 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 B4GALT1P15291 398 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 CASP3P42574 277 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 ACTN3Q08043 901 aaPredicted RBP4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 GCKRQ14397 625 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 FCN2Q15485 313 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 PLPP4Q5VZY2 271 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 DOK6Q6PKX4 331 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 C3P1Q6ZMU1 363 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 NLRP14Q86W24 1093 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 NAT8LQ8N9F0 302 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 ERGIC2Q96RQ1 377 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 PKP2Q99959 881 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 VGLL1Q99990 258 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 CCM2Q9BSQ5 444 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 CABLES2Q9BTV7 478 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 VIPAS39Q9H9C1 493 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 UBE2TQ9NPD8 197 aaPredicted RBP4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 IL1RAPQ9NPH3 570 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 EXOC6BQ9Y2D4 811 aa4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 MRPS18CQ9Y3D5 142 aaKnown RBP4.66□□□□□ -1.66
SMARCE1-219ENST00000583294 IGHV3-20A0A0C4DH32 117 aa4.65□□□□□ -1.67
SMARCE1-219ENST00000583294 A0A0J9YWU9 116 aa4.65□□□□□ -1.67
SMARCE1-219ENST00000583294 IQCMA0A1B0GVH7 501 aa4.65□□□□□ -1.67
SMARCE1-219ENST00000583294 TMEM129A0AVI4 362 aa4.65□□□□□ -1.67
SMARCE1-219ENST00000583294 RNF103O00237 685 aa4.65□□□□□ -1.67
SMARCE1-219ENST00000583294 PSMD3O43242 534 aa4.65□□□□□ -1.67
SMARCE1-219ENST00000583294 TNFSF12O43508 249 aa4.65□□□□□ -1.67
SMARCE1-219ENST00000583294 ANGPTL1O95841 491 aa4.65□□□□□ -1.67
SMARCE1-219ENST00000583294 SERPINB2P05120 415 aa4.65□□□□□ -1.67
SMARCE1-219ENST00000583294 GSTA2P09210 222 aa4.65□□□□□ -1.67
SMARCE1-219ENST00000583294 THEGLP0DJG4 465 aa4.65□□□□□ -1.67
SMARCE1-219ENST00000583294 OR1D2P34982 312 aa4.65□□□□□ -1.67
SMARCE1-219ENST00000583294 NDST2P52849 883 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms