RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 PPP4R1Q8TF05 950 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 ZNF483Q8TF39 744 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 TM9SF4Q92544 642 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 PTCHD1Q96NR3 888 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 AGAP4Q96P64 663 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 QRFPRQ96P65 431 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 CENPKQ9BS16 269 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 TUBB6Q9BUF5 446 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 NPLQ9BXD5 320 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 ROGDIQ9GZN7 287 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 ZBTB26Q9HCK0 441 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 ZNF462Q96JM2 2506 aa11.86□□□□□ -0.51
SMARCE1-218ENST00000582955 DLX3O60479 287 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 SUPT7LO94864 414 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 OTCP00480 354 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 SERPINA7P05543 415 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 CELA2AP08217 269 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 NUDT17P0C025 328 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 PRR35P0CG20 571 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 ICAM2P13598 275 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 MAOAP21397 527 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 CASRP41180 1078 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 NEK2P51955 445 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 CDH13P55290 713 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 RAB38P57729 211 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 OR4D2P58180 307 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 RPS13P62277 151 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 AP2B1P63010 937 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 HERVK_113P63132 956 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 TRAF3Q13114 568 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 RASA2Q15283 850 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 AP5B1Q2VPB7 878 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 BTBD16Q32M84 506 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 DEPDC1Q5TB30 811 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 PAPD4Q6PIY7 484 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 QSOX2Q6ZRP7 698 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 LINC00696Q6ZRV3 163 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 UBE3DQ7Z6J8 389 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 MILR1Q7Z6M3 343 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 SLC22A9Q8IVM8 553 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 ZADH2Q8N4Q0 377 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 SIRT6Q8N6T7 355 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 ARMC2Q8NEN0 867 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 OR4F6Q8NGB9 312 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 BRIX1Q8TDN6 353 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 ADAMTS18Q8TE60 1221 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 CAVIN3Q969G5 261 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 RGMAQ96B86 450 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 MTFMTQ96DP5 389 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 MAGEB10Q96LZ2 347 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 TBCDQ9BTW9 1192 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 NTMT1Q9BV86 223 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 ERVK-6Q9BXR3 956 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 PARD6BQ9BYG5 372 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 EPN3Q9H201 632 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 EPS8L2Q9H6S3 715 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 ZBTB20Q9HC78 741 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 PRDM9Q9NQV7 894 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 PRDM7Q9NQW5 492 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 LUZP4Q9P127 313 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 PTGFRNQ9P2B2 879 aa11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 MRPS33Q9Y291 106 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-218ENST00000582955 SCN2AQ99250 2005 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 PYCARD-AS1I3L0S3 204 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 J3QKU1 62 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 CLDN4O14493 209 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 COPEO14579 308 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 ITGAMP11215 1152 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 KRT4P19013 534 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 HIST1H1TP22492 207 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 ATP5A1P25705 553 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 PTX3P26022 381 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 CCT5P48643 541 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 CD97P48960 835 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 LIM2P55344 173 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 TLE1Q04724 770 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 CLCQ05315 142 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 IFT88Q13099 833 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 SLC13A2Q13183 592 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 RCN2Q14257 317 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 ZNF678Q5SXM1 525 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 FRG2Q64ET8 278 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 SLC6A19Q695T7 634 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 JMJD6Q6NYC1 403 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 ISLR2Q6UXK2 745 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 ZNF793Q6ZN11 406 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 RIPOR1Q6ZS17 1223 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 C4orf33Q8N1A6 199 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 RIBC1Q8N443 379 aaPredicted RBP11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 AMER2Q8N7J2 671 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 RBMXL3Q8N7X1 1067 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 ACOT4Q8N9L9 421 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 CCDC63Q8NA47 563 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 WDR20Q8TBZ3 569 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 TRPC4APQ8TEL6 797 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 IMMP1LQ96LU5 166 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 TMEM237Q96Q45 408 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 FRG2BQ96QU4 278 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 CSF3RQ99062 836 aa11.84□□□□□ -0.51
SMARCE1-218ENST00000582955 LPAR4Q99677 370 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms