RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 ITIH1P19827 911 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 FCGR2BP31994 310 aaPredicted RBP3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 FCGR2CP31995 323 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 ATP4BP51164 291 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 SRPXP78539 464 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 C3AR1Q16581 482 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 MEP1BQ16820 701 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 ANKRD20A4Q4UJ75 823 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 ANKRD20A8PQ5CZ79 823 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 ANKRD20A2Q5SQ80 823 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 ANKRD20A1Q5TYW2 823 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 ANKRD20A3Q5VUR7 823 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 OTOAQ7RTW8 1153 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 KRT77Q7Z794 578 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 CATSPER3Q86XQ3 398 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 AQP12AQ8IXF9 295 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 PHC2Q8IXK0 858 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 ELMOD1Q8N336 334 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 POM121L12Q8N7R1 296 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 OR7G3Q8NG95 312 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 SSC4DQ8WTU2 575 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 C11orf52Q96A22 123 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 HNRNPABQ99729 332 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 UBAC1Q9BSL1 405 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 UTP14AQ9BVJ6 771 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 TRIM7Q9C029 511 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 JPT2Q9H910 190 aa3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 MRPL17Q9NRX2 175 aaKnown RBP3.67□□□□□ -1.82
SMCHD1-204ENST00000581226 TDRD15B5MCY1 1934 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 H0Y626 953 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 M0R296 226 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 STX6O43752 255 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 CRCPO75575 148 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 LETM1O95202 739 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 GH1P01241 217 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 C8orf89P0DMQ9 161 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 FRKP42685 505 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 CRYBA2P53672 197 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 BACE1P56817 501 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 KNOP1Q1ED39 458 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 PLPP4Q5VZY2 271 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 ZNF776Q68DI1 518 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 SIGLEC15Q6ZMC9 328 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 MCM10Q7L590 875 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 SLC25A42Q86VD7 318 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 KCNMB4Q86W47 210 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 CDC20BQ86Y33 519 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 NKAIN3Q8N8D7 197 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 RNF149Q8NC42 400 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 ZNF274Q96GC6 653 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 CDKN2AIPNLQ96HQ2 116 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 RASL10BQ96S79 203 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 CCM2Q9BSQ5 444 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 PUS3Q9BZE2 481 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 STRADBQ9C0K7 418 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 VIPAS39Q9H9C1 493 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 COPS7BQ9H9Q2 264 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 WDR41Q9HAD4 459 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 PLEKHA3Q9HB20 300 aa3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 UBE2TQ9NPD8 197 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-204ENST00000581226 MAGEB16A2A368 324 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 A4D1N5 150 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 SHISA9B4DS77 424 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 ANHXE9PGG2 379 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 OGTO15294 1046 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 P2RX6O15547 441 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 ATP9AO75110 1047 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 NME6O75414 186 aaPredicted RBP3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 FGF19O95750 216 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 SLC16A8O95907 504 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 HOXD4P09016 255 aaPredicted RBP3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 ACKR3P25106 362 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 RPL9P32969 192 aaKnown RBP3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 KRT2P35908 639 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 PTGER3P43115 390 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 RIDAP52758 137 aaKnown RBP3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 ST8SIA6P61647 398 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 YWHAHQ04917 246 aaPredicted RBP3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 SLC3A1Q07837 685 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 ARHGAP1Q07960 439 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 GPR50Q13585 617 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 FAM182AQ5T1J6 154 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 LRRC38Q5VT99 294 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 AGAP6Q5VW22 663 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 NHLRC1Q6VVB1 395 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 TIPARPQ7Z3E1 657 aaKnown RBP3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 TOMM40LQ969M1 308 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 TEKT1Q969V4 418 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 FOXN4Q96NZ1 517 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 ALKBH3Q96Q83 286 aaPredicted RBP3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 TNFRSF13CQ96RJ3 184 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 PSMB7Q99436 277 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 ZNF559Q9BR84 538 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 PINK1Q9BXM7 581 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 OCR1Q9BZK8 76 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 MOB1AQ9H8S9 216 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 ITM2BQ9Y287 266 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 SH3GLB1Q9Y371 365 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 AUP1Q9Y679 476 aa3.65□□□□□ -1.83
SMCHD1-204ENST00000581226 STYXL1Q9Y6J8 313 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms