RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SGK494L7N484 410 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 CLDN4O14493 209 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 SDHDO14521 159 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 FOXS1O43638 330 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 PCDH7O60245 1069 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 TIAF1O95411 115 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 ADRB1P08588 477 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 ANXA4P09525 319 aaPredicted RBP13.53□□□□□ -0.24
SKA2-205ENST00000580541 FAM58BPP0C7Q3 252 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 RNH1P13489 461 aaKnown RBP13.53□□□□□ -0.24
SKA2-205ENST00000580541 ITGAXP20702 1163 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 TIA1P31483 386 aaKnown RBP eCLIP13.53□□□□□ -0.245e-7■■□□□ 11.7
SKA2-205ENST00000580541 RORAP35398 523 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 BUD31P41223 144 aaPredicted RBP13.53□□□□□ -0.24
SKA2-205ENST00000580541 ASMTP46597 345 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 IDH3AP50213 366 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 ARFIP2P53365 341 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 RPS6KA2Q15349 733 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 PRAMEF17Q5VTA0 474 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 C1orf189Q5VU69 101 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 METTL21CQ5VZV1 264 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 OGFOD2Q6N063 350 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 NOXRED1Q6NXP6 359 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 LARP4Q71RC2 724 aaKnown RBP eCLIP13.53□□□□□ -0.241e-6■□□□□ 10.2
SKA2-205ENST00000580541 UBE3DQ7Z6J8 389 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 GPR180Q86V85 440 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 MR1Q95460 341 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 APIPQ96GX9 242 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 MAELQ96JY0 434 aaKnown RBP13.53□□□□□ -0.24
SKA2-205ENST00000580541 C3orf30Q96M34 536 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 GBP5Q96PP8 586 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 MKKSQ9NPJ1 570 aaPredicted RBP13.53□□□□□ -0.24
SKA2-205ENST00000580541 TCF7L2Q9NQB0 619 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 ZNF282Q9UDV7 671 aaPredicted RBP13.53□□□□□ -0.24
SKA2-205ENST00000580541 DCTN4Q9UJW0 460 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 NXT1Q9UKK6 140 aaKnown RBP13.53□□□□□ -0.24
SKA2-205ENST00000580541 KLK13Q9UKR3 277 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 PSME2Q9UL46 239 aa13.53□□□□□ -0.24
SKA2-205ENST00000580541 A0A0G2JN53 185 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 GOLGA8QA0A0J9YX86 632 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 GOLGA8OA6NCC3 632 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 SYNDIG1LA6NDD5 238 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.52□□□□□ -0.25
SKA2-205ENST00000580541 GOLGA8NF8WBI6 632 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 RTCAO00442 366 aaKnown RBP13.52□□□□□ -0.25
SKA2-205ENST00000580541 ZNF195O14628 629 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 SHOX2O60902 331 aaPredicted RBP13.52□□□□□ -0.25
SKA2-205ENST00000580541 DLGAP3O95886 979 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 JAK1P23458 1154 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 EPHA3P29320 983 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 RPL3P39023 403 aaKnown RBP13.52□□□□□ -0.25
SKA2-205ENST00000580541 OR1D4P47884 311 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 SEC24CP53992 1094 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 RPS15P62841 145 aaKnown RBP13.52□□□□□ -0.25
SKA2-205ENST00000580541 RPL38P63173 70 aaKnown RBP13.52□□□□□ -0.25
SKA2-205ENST00000580541 ZNF763Q0D2J5 394 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 BIKQ13323 160 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 HEPACAMQ14CZ8 416 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 KIAA0040Q15053 153 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 GSTA3Q16772 222 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 RFTN2Q52LD8 501 aaPredicted RBP13.52□□□□□ -0.25
SKA2-205ENST00000580541 OVCH1Q7RTY7 1134 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 ERMP1Q7Z2K6 904 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 MARCH9Q86YJ5 346 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 SLC38A9Q8NBW4 561 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 GALNT6Q8NCL4 622 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 OR2T11Q8NH01 316 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 OR51Q1Q8NH59 317 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 STARD8Q92502 1023 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 FKBP10Q96AY3 582 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 OR1F2PQ96R84 312 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 PRPF18Q99633 342 aaKnown RBP13.52□□□□□ -0.25
SKA2-205ENST00000580541 EFHD1Q9BUP0 239 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 SPRY4Q9C004 299 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 AICDAQ9GZX7 198 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 WDR55Q9H6Y2 383 aaPredicted RBP13.52□□□□□ -0.25
SKA2-205ENST00000580541 LHX9Q9NQ69 397 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 PRDM9Q9NQV7 894 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 TRPC4Q9UBN4 977 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 DAPP1Q9UN19 280 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 PADI2Q9Y2J8 665 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 MRPS2Q9Y399 296 aaKnown RBP13.52□□□□□ -0.25
SKA2-205ENST00000580541 PTGDR2Q9Y5Y4 395 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 MAU2Q9Y6X3 613 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 SPTBN4Q9H254 2564 aa13.52□□□□□ -0.25
SKA2-205ENST00000580541 A0A0A6YYD5 115 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 UBDO15205 165 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 CHST10O43529 356 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 BRINP1O60477 761 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 RDH16O75452 317 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 JUNP05412 331 aaKnown RBP13.51□□□□□ -0.25
SKA2-205ENST00000580541 PRR35P0CG20 571 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 DRD2P14416 443 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 IDO1P14902 403 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 ZNF28P17035 718 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 CPN2P22792 545 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 CERS1P27544 350 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 TPP2P29144 1249 aaPredicted RBP13.51□□□□□ -0.25
SKA2-205ENST00000580541 LIM2P55344 173 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 RAB38P57729 211 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms