RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 URADA6NGE7 173 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 SAGE2PA6NJ88 616 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 PRKNO60260 465 aaPredicted RBP11.12□□□□□ -0.63
LITAF-219ENST00000576334 ZG16O60844 167 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 CLEC3AO75596 197 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 NEURL1O76050 574 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 MYO1DO94832 1006 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 UNC5CO95185 931 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 S100BP04271 92 aaPredicted RBP11.12□□□□□ -0.63
LITAF-219ENST00000576334 LTA4HP09960 611 aaKnown RBP11.12□□□□□ -0.63
LITAF-219ENST00000576334 TPP2P29144 1249 aaPredicted RBP11.12□□□□□ -0.63
LITAF-219ENST00000576334 MSH2P43246 934 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 LIM2P55344 173 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 STXBP1P61764 594 aaKnown RBP11.12□□□□□ -0.63
LITAF-219ENST00000576334 OC90Q02509 493 aaPredicted RBP11.12□□□□□ -0.63
LITAF-219ENST00000576334 IRF8Q02556 426 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 ADPRMQ3LIE5 342 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 ABHD17CQ6PCB6 329 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 TBC1D1Q86TI0 1168 aaPredicted RBP11.12□□□□□ -0.63
LITAF-219ENST00000576334 FJX1Q86VR8 437 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 ZNF227Q86WZ6 799 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 SCUBE1Q8IWY4 988 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 PLD6Q8N2A8 252 aaKnown RBP11.12□□□□□ -0.63
LITAF-219ENST00000576334 TCAIMQ8N3R3 496 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 APCDD1LQ8NCL9 501 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 OR2L5Q8NG80 312 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 STAG3L4Q8TBR4 150 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 WDR34Q96EX3 536 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 PTCD3Q96EY7 689 aaKnown RBP11.12□□□□□ -0.63
LITAF-219ENST00000576334 FAR2Q96K12 515 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 UTP23Q9BRU9 249 aaKnown RBP11.12□□□□□ -0.63
LITAF-219ENST00000576334 PHACTR1Q9C0D0 580 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 NT5DC2Q9H857 520 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 CNOT10Q9H9A5 744 aaKnown RBP11.12□□□□□ -0.63
LITAF-219ENST00000576334 PRDM7Q9NQW5 492 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 SNX15Q9NRS6 342 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 TEKT2Q9UIF3 430 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 SH3BGRL2Q9UJC5 107 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 MYO7BQ6PIF6 2116 aa11.12□□□□□ -0.63
LITAF-219ENST00000576334 ITPR2Q14571 2701 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 CYR61O00622 381 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 B3GALT2O43825 422 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 KERAO60938 352 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 ACSL3O95573 720 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 DDAH2O95865 285 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 TGFB1P01137 390 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 ALDOAP04075 364 aaKnown RBP11.11□□□□□ -0.63
LITAF-219ENST00000576334 PCNAP12004 261 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 CRABP2P29373 138 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 ECHS1P30084 290 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 RAB38P57729 211 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 AP2B1P63010 937 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 SKP1P63208 163 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 ID2Q02363 134 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 CKAP4Q07065 602 aaKnown RBP11.11□□□□□ -0.63
LITAF-219ENST00000576334 SLC13A2Q13183 592 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 DDX39BQ13838 428 aaKnown RBP11.11□□□□□ -0.63
LITAF-219ENST00000576334 RNFT1Q5M7Z0 435 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 GFRALQ6UXV0 394 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 GALNTL5Q7Z4T8 443 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 RPS19BP1Q86WX3 136 aaKnown RBP11.11□□□□□ -0.63
LITAF-219ENST00000576334 SLC5A8Q8N695 610 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 TEX9Q8N6V9 391 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 ZNF321PQ8N8H1 164 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 SUN3Q8TAQ9 357 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 DOK4Q8TEW6 326 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 ZNF473Q8WTR7 871 aaKnown RBP11.11□□□□□ -0.63
LITAF-219ENST00000576334 IFT81Q8WYA0 676 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 GPR78Q96P69 363 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 MAPKAP1Q9BPZ7 522 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 CAPS2Q9BXY5 557 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 OR51B5Q9H339 312 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 CDC42EP4Q9H3Q1 356 aaKnown RBP11.11□□□□□ -0.63
LITAF-219ENST00000576334 EHD1Q9H4M9 534 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 NMRAL1Q9HBL8 299 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 PRTFDC1Q9NRG1 225 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 NUDT4Q9NZJ9 180 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 KCMF1Q9P0J7 381 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 ACOT9Q9Y305 439 aa11.11□□□□□ -0.63
LITAF-219ENST00000576334 CACNA1DQ01668 2161 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 A0A096LPK6 155 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 TRBV11-1A0A0K0K1C0 115 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 WASHC1A8K0Z3 465 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 K7EPI3 171 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 LDB3O75112 727 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 PRKRAO75569 313 aaKnown RBP11.1□□□□□ -0.63
LITAF-219ENST00000576334 SIX3O95343 332 aaPredicted RBP11.1□□□□□ -0.63
LITAF-219ENST00000576334 STSP08842 583 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 RFC3P40938 356 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 PIK3CGP48736 1102 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 NR0B1P51843 470 aaKnown RBP11.1□□□□□ -0.63
LITAF-219ENST00000576334 MLF1P58340 268 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 HSF1Q00613 529 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 NAB1Q13506 487 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 PFKFB4Q16877 469 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 CDKL4Q5MAI5 379 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 NIPAL1Q6NVV3 410 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 TRIM40Q6P9F5 258 aa11.1□□□□□ -0.63
LITAF-219ENST00000576334 RPS27LQ71UM5 84 aaKnown RBP11.1□□□□□ -0.63
LITAF-219ENST00000576334 LRRC70Q7Z2Q7 622 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms