RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	STXBP1	P61764	594 aa	Known RBP	13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	IRF8	Q02556	426 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	PCDH1	Q08174	1060 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	IFFO1	Q0D2I5	559 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	RASA2	Q15283	850 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	LGSN	Q5TDP6	509 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	ABHD17B	Q5VST6	288 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	ABHD17C	Q6PCB6	329 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	QSOX2	Q6ZRP7	698 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	TDRP	Q86YL5	185 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	CYP4X1	Q8N118	509 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	OR2L5	Q8NG80	312 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	ELP5	Q8TE02	316 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	ZNF473	Q8WTR7	871 aa	Known RBP	13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	UBTD2	Q8WUN7	234 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	SIGLEC12	Q96PQ1	595 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	LPAR4	Q99677	370 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	SLC29A3	Q9BZD2	475 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	PITHD1	Q9GZP4	211 aa	Predicted RBP	13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	REXO4	Q9GZR2	422 aa	Known RBP	13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	RNF32	Q9H0A6	362 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	KCNK13	Q9HB14	408 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	PRDM9	Q9NQV7	894 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	ANKRD10	Q9NXR5	420 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	NUDT4	Q9NZJ9	180 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	KCMF1	Q9P0J7	381 aa		13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	ERRFI1	Q9UJM3	462 aa	Predicted RBP	13.28	□□□□□ -0.28
EDC4-210	ENST00000575507	FLNC	Q14315	2725 aa		13.27	□□□□□ -0.28
EDC4-210	ENST00000575507		A0A087X1B8	175 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	OR5H15	A6NDH6	313 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507		K7EPI3	171 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	RTCA	O00442	366 aa	Known RBP	13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	CYR61	O00622	381 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	KLK8	O60259	260 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	CDH16	O75309	829 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	SH3BGRL	O75368	114 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	KRT38	O76015	456 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	KLHL2	O95198	593 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	TGFB1	P01137	390 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	SHBG	P04278	402 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	CERS1	P27544	350 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	TYK2	P29597	1187 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	TUBA3C	Q13748	450 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	TBCC	Q15814	346 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	EXT1	Q16394	746 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	PFKFB4	Q16877	469 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	ZNF468	Q5VIY5	522 aa	Predicted RBP	13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	NIPAL1	Q6NVV3	410 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	TUBA3E	Q6PEY2	450 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	ADGRD1	Q6QNK2	874 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	LRIG3	Q6UXM1	1119 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	ZNF793	Q6ZN11	406 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	LRRC70	Q7Z2Q7	622 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	CROCCP2	Q86T23	111 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	SCUBE1	Q8IWY4	988 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	LAS2	Q8IYD9	372 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	ST6GALNAC3	Q8NDV1	305 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	TTL	Q8NG68	377 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	RHEBL1	Q8TAI7	183 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	DCAKD	Q8WVC6	231 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	ZNF354B	Q96LW1	612 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	CSF3R	Q99062	836 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	SLX1A	Q9BQ83	275 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	EFCAB11	Q9BUY7	163 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	TMEM109	Q9BVC6	243 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	HES7	Q9BYE0	225 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	CDCP1	Q9H5V8	836 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	AGPAT4	Q9NRZ5	378 aa		13.27	□□□□□ -0.29
EDC4-210	ENST00000575507	TRAV17	A0A0B4J275	112 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	IQANK1	A0A1B0GTG1	560 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	WIPF3	A6NGB9	483 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	SIX3	O95343	332 aa	Predicted RBP	13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	S100B	P04271	92 aa	Predicted RBP	13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	MST1	P26927	711 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	GSTM2	P28161	218 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	GCA	P28676	217 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	MAGEA12	P43365	314 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	LIM2	P55344	173 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	SKP1	P63208	163 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	PMP22	Q01453	160 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	CASP8	Q14790	479 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	SETDB1	Q15047	1291 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	ACAP2	Q15057	778 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	SPINK14	Q6IE38	97 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	HDX	Q7Z353	690 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	ZNF227	Q86WZ6	799 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	RIBC1	Q8N443	379 aa	Predicted RBP	13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	TEX9	Q8N6V9	391 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	FAM47B	Q8NA70	645 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	MDS2	Q8NDY4	140 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	OR7G3	Q8NG95	312 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	SSC4D	Q8WTU2	575 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	MTBP	Q96DY7	904 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	SEC16B	Q96JE7	1060 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	FAR2	Q96K12	515 aa		13.26	□□□□□ -0.29
EDC4-210	ENST00000575507	SORBS1	Q9BX66	1292 aa	Known RBP	13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms