RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 CDYL2Q8N8U2 506 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 METTL6Q8TCB7 284 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 SELENOMQ8WWX9 145 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 ZBTB9Q96C00 473 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 QRFPRQ96P65 431 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 RBCK1Q9BYM8 510 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 SLC29A3Q9BZD2 475 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 VN1R1Q9GZP7 353 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 GSTO2Q9H4Y5 243 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 MID1IP1Q9NPA3 183 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 KCNK9Q9NPC2 374 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 ATP13A2Q9NQ11 1180 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 PRDM7Q9NQW5 492 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 NMRK1Q9NWW6 199 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 AHSPQ9NZD4 102 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 SLC17A7Q9P2U7 560 aa14.35□□□□□ -0.11
LITAF-217ENST00000575426 CLDN4O14493 209 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 KLHL41O60662 606 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 DNAJB6O75190 326 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 CDC123O75794 336 aaPredicted RBP14.34□□□□□ -0.11
LITAF-217ENST00000575426 ENO1P06733 434 aaKnown RBP14.34□□□□□ -0.11
LITAF-217ENST00000575426 CREB1P16220 341 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 ATP5A1P25705 553 aaKnown RBP14.34□□□□□ -0.11
LITAF-217ENST00000575426 CERS1P27544 350 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 RAB38P57729 211 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 CHAF1BQ13112 559 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 KCNAB2Q13303 367 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 LY6DQ14210 128 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 CASP8Q14790 479 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 PCLAFQ15004 111 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 DCAF10Q5QP82 559 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 KIRREL2Q6UWL6 708 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 FRMD7Q6ZUT3 714 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 PLPP5Q8NEB5 264 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 CNDP1Q96KN2 507 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 PTCHD1Q96NR3 888 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 SSU72Q9NP77 194 aaKnown RBP14.34□□□□□ -0.11
LITAF-217ENST00000575426 TUBD1Q9UJT1 453 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 FBXL4Q9UKA2 621 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 PPT2Q9UMR5 302 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 ACTL7BQ9Y614 415 aa14.34□□□□□ -0.11
LITAF-217ENST00000575426 TNRC6AQ8NDV7 1962 aaKnown RBP14.33□□□□□ -0.12
LITAF-217ENST00000575426 CROCCQ5TZA2 2017 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 NSG1A0A0A6YYJ2 146 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 A6NL46 340 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 RTCAO00442 366 aaKnown RBP14.33□□□□□ -0.12
LITAF-217ENST00000575426 TYROBPO43914 113 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 PRMT3O60678 531 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 ULK1O75385 1050 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 ESRRBO95718 433 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 HPP00738 406 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 PDYNP01213 254 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 HIST1H1TP22492 207 aaPredicted RBP14.33□□□□□ -0.12
LITAF-217ENST00000575426 ALDH3A1P30838 453 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 EEF1A2Q05639 463 aaKnown RBP14.33□□□□□ -0.12
LITAF-217ENST00000575426 ACTN3Q08043 901 aaPredicted RBP14.33□□□□□ -0.12
LITAF-217ENST00000575426 AIMP2Q13155 320 aaKnown RBP14.33□□□□□ -0.12
LITAF-217ENST00000575426 SLAMF1Q13291 335 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 NSDHLQ15738 373 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 IRAK1BP1Q5VVH5 260 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 CPZQ66K79 652 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 CYP20A1Q6UW02 462 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 TMEM205Q6UW68 189 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 NDUFAF7Q7L592 441 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 UBE3DQ7Z6J8 389 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 HOMEZQ8IX15 550 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 ACOT4Q8N9L9 421 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 OR11G2Q8NGC1 345 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 SLC39A7Q92504 469 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 C8orf44Q96CB5 159 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 TRIM55Q9BYV6 548 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 BRF2Q9HAW0 419 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 LYRM4Q9HD34 91 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 ZNF225Q9UK10 706 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 DAPP1Q9UN19 280 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 SLC12A4Q9UP95 1085 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 FAM208BQ5VWN6 2430 aa14.33□□□□□ -0.12
LITAF-217ENST00000575426 LOC400499M0QZD8 3231 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 PCSK5Q92824 1860 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 A0A1B0GTL3 188 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 FAM227AF5H4B4 570 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 MANBAO00462 879 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 PLPP1O14494 284 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 TM9SF1O15321 606 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 DNAJB5O75953 348 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 SEMA3DO95025 777 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 ZWINTO95229 277 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 NEFHP12036 1026 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 HSD3B1P14060 373 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 HSD3B2P26439 372 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 LIM2P55344 173 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 RHAGQ02094 409 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 ZNF33BQ06732 778 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 ABRAXAS2Q15018 415 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 TNFAIP8L3Q5GJ75 292 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 QSOX2Q6ZRP7 698 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 PAGE2Q7Z2X7 111 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 HDXQ7Z353 690 aa14.32□□□□□ -0.12
LITAF-217ENST00000575426 CPEB2Q7Z5Q1 589 aaKnown RBP14.32□□□□□ -0.12
LITAF-217ENST00000575426 EXD3Q8N9H8 876 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms