RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ALOX5P09917 674 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 CBLP22681 906 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 GADD45AP24522 165 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ACADLP28330 430 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 WEE1P30291 646 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 CHI3L1P36222 383 aaPredicted RBP8.55□□□□□ -1.04
NCBP3-204ENST00000574911 CTSKP43235 329 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 FPGSQ05932 587 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 TSTA3Q13630 321 aaPredicted RBP8.55□□□□□ -1.04
NCBP3-204ENST00000574911 IRF3Q14653 427 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 UNC5DQ6UXZ4 953 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 IKBIPQ70UQ0 350 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ZNF765Q7L2R6 523 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 VN1R5Q7Z5H4 357 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ARMC8Q8IUR7 673 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 OR9Q2Q8NGE9 314 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 OR5AK3PQ8NH89 298 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 MCFD2Q8NI22 146 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ZCCHC2Q9C0B9 1178 aaKnown RBP8.55□□□□□ -1.04
NCBP3-204ENST00000574911 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ICKQ9UPZ9 632 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 IRAK3Q9Y616 596 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 C17orf113A0A1B0GUU1 675 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 PCDH17O14917 1159 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 RECKO95980 971 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 IFNA14P01570 189 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 IL3P08700 152 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ACRP10323 421 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 CLK1P49759 484 aaKnown RBP8.55□□□□□ -1.04
NCBP3-204ENST00000574911 PPP5CP53041 499 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 METAP1P53582 386 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 LIMK1P53667 647 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 TRAPPC5Q8IUR0 188 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ZNF547Q8IVP9 402 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 SLC30A8Q8IWU4 369 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ZNF740Q8NDX6 193 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ZNF675Q8TD23 568 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 WFIKKN2Q8TEU8 576 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 UBE2E3Q969T4 207 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ARRDC3Q96B67 414 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 COL21A1Q96P44 957 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ZDHHC5Q9C0B5 715 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 NXF2Q9GZY0 626 aaKnown RBP8.55□□□□□ -1.04
NCBP3-204ENST00000574911 MMP27Q9H306 513 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ZBTB20Q9HC78 741 aaPredicted RBP8.55□□□□□ -1.04
NCBP3-204ENST00000574911 AMBNQ9NP70 447 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 CCDC177Q9NQR7 707 aaPredicted RBP8.55□□□□□ -1.04
NCBP3-204ENST00000574911 GPR83Q9NYM4 423 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 TAAR2Q9P1P5 351 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ANGPT4Q9Y264 503 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 HCN4Q9Y3Q4 1203 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 PCDHGA3Q9Y5H0 932 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 ENPP4Q9Y6X5 453 aa8.55□□□□□ -1.04
NCBP3-204ENST00000574911 PTPRSQ13332 1948 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 TRBC2A0A5B9 178 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 ARRDC5A6NEK1 342 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 KPNA3O00505 521 aaPredicted RBP8.54□□□□□ -1.04
NCBP3-204ENST00000574911 POP7O75817 140 aaKnown RBP8.54□□□□□ -1.04
NCBP3-204ENST00000574911 CCNB2O95067 398 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 TIMP1P01033 207 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 STSP08842 583 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 UQCRC2P22695 453 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 CD40LGP29965 261 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 GRK5P34947 590 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 IDH2P48735 452 aaKnown RBP8.54□□□□□ -1.04
NCBP3-204ENST00000574911 DGKGP49619 791 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 NUDT6P53370 316 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 NTHL1P78549 312 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 SFSWAPQ12872 951 aaKnown RBP8.54□□□□□ -1.04
NCBP3-204ENST00000574911 EIF4HQ15056 248 aaKnown RBP8.54□□□□□ -1.04
NCBP3-204ENST00000574911 DHCR24Q15392 516 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 INAVAQ3KP66 663 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 ZNF404Q494X3 552 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 CYP27C1Q4G0S4 372 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 FBXO43Q4G163 708 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 AGAP7PQ5VUJ5 663 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 LCTLQ6UWM7 567 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 PLEKHG7Q6ZR37 379 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 USP43Q70EL4 1123 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 TRMT11Q7Z4G4 463 aaKnown RBP8.54□□□□□ -1.04
NCBP3-204ENST00000574911 MRPL43Q8N983 215 aaKnown RBP8.54□□□□□ -1.04
NCBP3-204ENST00000574911 NUS1Q96E22 293 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 FAM129BQ96TA1 746 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 SLC6A16Q9GZN6 736 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 DPEP2Q9H4A9 486 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 ZNF556Q9HAH1 456 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 SAGE1Q9NXZ1 904 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 PI15O43692 258 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 PRNPP04156 253 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 RB1P06400 928 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 ADORA3P0DMS8 318 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 RHCEP18577 417 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 FUT4P22083 530 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 TPP2P29144 1249 aaPredicted RBP8.54□□□□□ -1.04
NCBP3-204ENST00000574911 SOAT1P35610 550 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 EIF2DP41214 584 aaKnown RBP8.54□□□□□ -1.04
NCBP3-204ENST00000574911 GPR1P46091 355 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 DSTNP60981 165 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 HTRA4P83105 476 aaPredicted RBP8.54□□□□□ -1.04
NCBP3-204ENST00000574911 PRAMEF14Q5SWL7 426 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms