RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 POLR1EQ9GZS1 481 aaKnown RBP9.21□□□□□ -0.94
CCDC40-212ENST00000574799 MCCC2Q9HCC0 563 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 PRDM5Q9NQX1 630 aaPredicted RBP9.21□□□□□ -0.94
CCDC40-212ENST00000574799 FAM8A1Q9UBU6 413 aa9.21□□□□□ -0.94
CCDC40-212ENST00000574799 A0A0U1RQS6 177 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 MAGEB17A8MXT2 336 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 UPK3BL1B0FP48 263 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 UPK3BL2E5RIL1 263 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 B3GALT4O96024 378 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 ALAS2P22557 587 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 NUP62P37198 522 aaPredicted RBP9.2□□□□□ -0.94
CCDC40-212ENST00000574799 PSPHP78330 225 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 SLC39A12Q504Y0 691 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 RGL4Q8IZJ4 473 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 NLGN4YQ8NFZ3 816 aaPredicted RBP9.2□□□□□ -0.94
CCDC40-212ENST00000574799 TADA1Q96BN2 335 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 MCCC1Q96RQ3 725 aaPredicted RBP9.2□□□□□ -0.94
CCDC40-212ENST00000574799 B3GNT4Q9C0J1 378 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 AGO1Q9UL18 857 aaKnown RBP9.2□□□□□ -0.94
CCDC40-212ENST00000574799 POFUT2Q9Y2G5 429 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 WNT9AO14904 365 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 ADAM12O43184 909 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 RAMP2O60895 175 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 APOL3O95236 402 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 SOX14O95416 240 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 TBX18O95935 607 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 EOMESO95936 686 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 IGLV3-27P01718 113 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 FGF1P05230 155 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 NR2F6P10588 404 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 BCKDHAP12694 445 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 OGNP20774 298 aaKnown RBP9.2□□□□□ -0.94
CCDC40-212ENST00000574799 STOMP27105 288 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 ETV6P41212 452 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 ETV1P50549 477 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 HYAL2Q12891 473 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 RTP2Q5QGT7 225 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 AFTPHQ6ULP2 937 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 SLC24A5Q71RS6 500 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 DNAJC5GQ8N7S2 189 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 SRFBP1Q8NEF9 429 aaKnown RBP9.2□□□□□ -0.94
CCDC40-212ENST00000574799 RNFT2Q96EX2 444 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 RNF170Q96K19 258 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 COPS8Q99627 209 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 UQCC2Q9BRT2 126 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 KCNH6Q9H252 994 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 SIRT5Q9NXA8 310 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 ZNF225Q9UK10 706 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 MAN2B2Q9Y2E5 1009 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 MAB21L2Q9Y586 359 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 HELZP42694 1942 aaKnown RBP9.2□□□□□ -0.94
CCDC40-212ENST00000574799 H0YC42 278 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 INHAP05111 366 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 HLA-DMAP28067 261 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 MAPK1P28482 360 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 PCSK1P29120 753 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 HOXA9P31269 272 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 MC4RP32245 332 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 BRAT1Q6PJG6 821 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 CCDC71Q8IV32 467 aaPredicted RBP9.2□□□□□ -0.94
CCDC40-212ENST00000574799 FAM9CQ8IZT9 166 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 OR9Q2Q8NGE9 314 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 PXYLP1Q8TE99 480 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 KLHL6Q8WZ60 621 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 PDLIM5Q96HC4 596 aaKnown RBP9.2□□□□□ -0.94
CCDC40-212ENST00000574799 UROC1Q96N76 676 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 DCLRE1CQ96SD1 692 aaKnown RBP9.2□□□□□ -0.94
CCDC40-212ENST00000574799 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.2□□□□□ -0.94
CCDC40-212ENST00000574799 CHIAQ9BZP6 476 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 SERHL2Q9H4I8 314 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 ATP13A1Q9HD20 1204 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 SERHLQ9NQF3 203 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 ASAH2Q9NR71 780 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 RBFOX1Q9NWB1 397 aaKnown RBP9.2□□□□□ -0.94
CCDC40-212ENST00000574799 NUDT4Q9NZJ9 180 aa9.2□□□□□ -0.94
CCDC40-212ENST00000574799 SLC30A4O14863 429 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 FFAR2O15552 330 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 KDM4BO94953 1096 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 PRR35P0CG20 571 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 ANXA3P12429 323 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 DSTNP60981 165 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 HSF2Q03933 536 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 TWF1Q12792 350 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 EIF4HQ15056 248 aaKnown RBP9.19□□□□□ -0.94
CCDC40-212ENST00000574799 FCN2Q15485 313 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 SLC14A2Q15849 920 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 CNIH2Q6PI25 160 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 OTOP2Q7RTS6 562 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 METTL23Q86XA0 190 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 PIAS4Q8N2W9 510 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-212ENST00000574799 PGBD5Q8N414 524 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 DENND6BQ8NEG7 585 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 APH1BQ8WW43 257 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 SH3KBP1Q96B97 665 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.19□□□□□ -0.94
CCDC40-212ENST00000574799 ACTL8Q9H568 366 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 RANBP3Q9H6Z4 567 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-212ENST00000574799 SLC6A13Q9NSD5 602 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 GPRC5BQ9NZH0 403 aa9.19□□□□□ -0.94
CCDC40-212ENST00000574799 HCN3Q9P1Z3 774 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms