RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 MRPS2Q9Y399 296 aaKnown RBP12.84□□□□□ -0.35
NDE1-209ENST00000574109 TPRP12270 2363 aaKnown RBP12.83□□□□□ -0.36
NDE1-209ENST00000574109 TMEM233B4DJY2 109 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 C4orf51C9J302 202 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 SGK494L7N484 410 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 PIP5K1BO14986 540 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 SKAP2O75563 359 aaPredicted RBP12.83□□□□□ -0.36
NDE1-209ENST00000574109 MED26O95402 600 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 ETHE1O95571 254 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 RECKO95980 971 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 TCN2P20062 427 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 CERS1P27544 350 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 PPP2R1BP30154 601 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 DLSTP36957 453 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 BUD31P41223 144 aaPredicted RBP12.83□□□□□ -0.36
NDE1-209ENST00000574109 RAB38P57729 211 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 CLN3Q13286 438 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 SLC9A5Q14940 896 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 UGT3A2Q3SY77 523 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 ATP6AP1LQ52LC2 224 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 CRTC2Q53ET0 693 aaPredicted RBP12.83□□□□□ -0.36
NDE1-209ENST00000574109 SPDYAQ5MJ70 313 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 BROXQ5VW32 411 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 MRPL14Q6P1L8 145 aaKnown RBP12.83□□□□□ -0.36
NDE1-209ENST00000574109 LRRC69Q6ZNQ3 347 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 COX15Q7KZN9 410 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 PRSS41Q7RTY9 318 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 ACOT4Q8N9L9 421 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 CT55Q8WUE5 264 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 STON2Q8WXE9 905 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 TBC1D20Q96BZ9 403 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 MTFMTQ96DP5 389 aaKnown RBP12.83□□□□□ -0.36
NDE1-209ENST00000574109 HBEGFQ99075 208 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 MRPL1Q9BYD6 325 aaKnown RBP12.83□□□□□ -0.36
NDE1-209ENST00000574109 C20orf27Q9GZN8 174 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 WDR41Q9HAD4 459 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 PRDM7Q9NQW5 492 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 C1orf109Q9NX04 203 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 DAPP1Q9UN19 280 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 WBP11Q9Y2W2 641 aaKnown RBP12.83□□□□□ -0.36
NDE1-209ENST00000574109 MAU2Q9Y6X3 613 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 CROCCQ5TZA2 2017 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 SCN2AQ99250 2005 aa12.83□□□□□ -0.36
NDE1-209ENST00000574109 URB1O60287 2271 aaKnown RBP12.82□□□□□ -0.36
NDE1-209ENST00000574109 A0A0A6YYD5 115 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 TEX51A0A1B0GUA7 166 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 ZNF860A6NHJ4 632 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 VSTM2BA6NLU5 285 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 TERTO14746 1132 aaKnown RBP12.82□□□□□ -0.36
NDE1-209ENST00000574109 PCDH7O60245 1069 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 TGDSO95455 350 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 IGHEP01854 428 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 DDX5P17844 614 aaKnown RBP12.82□□□□□ -0.36
NDE1-209ENST00000574109 PTPN4P29074 926 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 TLX1P31314 330 aaPredicted RBP12.82□□□□□ -0.36
NDE1-209ENST00000574109 TIA1P31483 386 aaKnown RBP eCLIP12.82□□□□□ -0.36
NDE1-209ENST00000574109 BSGP35613 385 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 MDH1P40925 334 aaKnown RBP12.82□□□□□ -0.36
NDE1-209ENST00000574109 FOLR3P41439 243 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 XCR1P46094 333 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 OR1D4P47884 311 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 MAPK12P53778 367 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 HMGCS1Q01581 520 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 ZNF763Q0D2J5 394 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 TBL3Q12788 808 aaKnown RBP12.82□□□□□ -0.36
NDE1-209ENST00000574109 PDCD2Q16342 344 aaPredicted RBP12.82□□□□□ -0.36
NDE1-209ENST00000574109 TUBB8Q3ZCM7 444 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 ZNF793Q6ZN11 406 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 IKBIPQ70UQ0 350 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 UBE3DQ7Z6J8 389 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 PROSER1Q86XN7 944 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 FAM9CQ8IZT9 166 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 RNF175Q8N4F7 328 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 METTL27Q8N6F8 245 aaPredicted RBP12.82□□□□□ -0.36
NDE1-209ENST00000574109 C1orf52Q8N6N3 182 aaKnown RBP12.82□□□□□ -0.36
NDE1-209ENST00000574109 ENDOVQ8N8Q3 282 aaKnown RBP12.82□□□□□ -0.36
NDE1-209ENST00000574109 OR2Y1Q8NGV0 311 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 OR51Q1Q8NH59 317 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 CHTF18Q8WVB6 975 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 MIEF2Q96C03 454 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 IP6K3Q96PC2 410 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 ZNF717Q9BY31 904 aaPredicted RBP12.82□□□□□ -0.36
NDE1-209ENST00000574109 MEAF6Q9HAF1 191 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 LRTM1Q9HBL6 345 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 CTSFQ9UBX1 484 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 MMACHCQ9Y4U1 282 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 ASPMQ8IZT6 3477 aa12.82□□□□□ -0.36
NDE1-209ENST00000574109 GNG14A0A1W2PPG7 69 aa12.81□□□□□ -0.36
NDE1-209ENST00000574109 SAP18O00422 153 aaKnown RBP12.81□□□□□ -0.36
NDE1-209ENST00000574109 CLDN4O14493 209 aa12.81□□□□□ -0.36
NDE1-209ENST00000574109 LSM1O15116 133 aaKnown RBP12.81□□□□□ -0.36
NDE1-209ENST00000574109 TLX3O43711 291 aaPredicted RBP12.81□□□□□ -0.36
NDE1-209ENST00000574109 CAPNS1P04632 268 aa12.81□□□□□ -0.36
NDE1-209ENST00000574109 FHP07954 510 aa12.81□□□□□ -0.36
NDE1-209ENST00000574109 ZGLP1P0C6A0 271 aa12.81□□□□□ -0.36
NDE1-209ENST00000574109 NR2F6P10588 404 aa12.81□□□□□ -0.36
NDE1-209ENST00000574109 SERPINB3P29508 390 aa12.81□□□□□ -0.36
NDE1-209ENST00000574109 TNFRSF17Q02223 184 aa12.81□□□□□ -0.36
NDE1-209ENST00000574109 BTKQ06187 659 aa12.81□□□□□ -0.36
NDE1-209ENST00000574109 NKG7Q16617 165 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms