RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	C5AR2	Q9P296	337 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	CTSF	Q9UBX1	484 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	MAU2	Q9Y6X3	613 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	SCN3A	Q9NY46	2000 aa		13.62	□□□□□ -0.23
ABR-223	ENST00000573895	SPEN	Q96T58	3664 aa	Known RBP	13.61	□□□□□ -0.23
ABR-223	ENST00000573895	TRPC5OS	A6NMA1	111 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895		H0YIG0	161 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895		K7EM74	188 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	HDAC3	O15379	428 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	P2RX6	O15547	441 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	FOXS1	O43638	330 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	OR4F21	O95013	312 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	KRT6A	P02538	564 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	KRT6B	P04259	564 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	ZGLP1	P0C6A0	271 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	FBL	P22087	321 aa	Known RBP	13.61	□□□□□ -0.23
ABR-223	ENST00000573895	KRT6C	P48668	564 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	DOC2A	Q14183	400 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	KANK2	Q63ZY3	851 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	GRHL2	Q6ISB3	625 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	RNF165	Q6ZSG1	346 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	PIGW	Q7Z7B1	504 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	PLD3	Q8IV08	490 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	TBC1D19	Q8N5T2	526 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	METTL27	Q8N6F8	245 aa	Predicted RBP	13.61	□□□□□ -0.23
ABR-223	ENST00000573895	MFSD9	Q8NBP5	474 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	FDCSP	Q8NFU4	85 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	STON2	Q8WXE9	905 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	MIEF2	Q96C03	454 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	REPS1	Q96D71	796 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	SHCBP1L	Q9BZQ2	653 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	MKKS	Q9NPJ1	570 aa	Predicted RBP	13.61	□□□□□ -0.23
ABR-223	ENST00000573895	ATP13A2	Q9NQ11	1180 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	C14orf105	Q9NVL8	296 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	GPR83	Q9NYM4	423 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	KLHL14	Q9P2G3	628 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	ZNF225	Q9UK10	706 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	SNX6	Q9UNH7	406 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	SH2B3	Q9UQQ2	575 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	RNF11	Q9Y3C5	154 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	TSC22D4	Q9Y3Q8	395 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	MAP4K5	Q9Y4K4	846 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	PCDHGA11	Q9Y5H2	935 aa		13.61	□□□□□ -0.23
ABR-223	ENST00000573895	TRBC2	A0A5B9	178 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895		H0YIV9	168 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	SOCS6	O14544	535 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	NSA2	O95478	260 aa	Known RBP	13.6	□□□□□ -0.23
ABR-223	ENST00000573895	PDGFA	P04085	211 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	CYC1	P08574	325 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	KIT	P10721	976 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	CDH1	P12830	882 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	ALOX15	P16050	662 aa	Predicted RBP	13.6	□□□□□ -0.23
ABR-223	ENST00000573895	HMOX2	P30519	316 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	AVPR1B	P47901	424 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	KLC1	Q07866	573 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	AIMP2	Q13155	320 aa	Known RBP	13.6	□□□□□ -0.23
ABR-223	ENST00000573895	MYBPC3	Q14896	1274 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	UGT3A2	Q3SY77	523 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	VWA5B1	Q5TIE3	1220 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	TMEM214	Q6NUQ4	689 aa	Known RBP	13.6	□□□□□ -0.23
ABR-223	ENST00000573895	LETMD1	Q6P1Q0	360 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	KIRREL2	Q6UWL6	708 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	KRT78	Q8N1N4	520 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	GALNT16	Q8N428	558 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	DTWD1	Q8N5C7	304 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	CDYL2	Q8N8U2	506 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	AMER3	Q8N944	861 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	CCT6B	Q92526	530 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	MMAB	Q96EY8	250 aa	Predicted RBP	13.6	□□□□□ -0.23
ABR-223	ENST00000573895	ELAC2	Q9BQ52	826 aa	Known RBP	13.6	□□□□□ -0.23
ABR-223	ENST00000573895	AIF1L	Q9BQI0	150 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	NUDT9	Q9BW91	350 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	SOX17	Q9H6I2	414 aa	Predicted RBP	13.6	□□□□□ -0.23
ABR-223	ENST00000573895	ADGRE2	Q9UHX3	823 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	HS3ST3B1	Q9Y662	390 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	SLC22A7	Q9Y694	548 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895	USH1C	Q9Y6N9	552 aa		13.6	□□□□□ -0.23
ABR-223	ENST00000573895		A0A1W2PQ72	361 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	SERTM1	A2A2V5	107 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	LCMT2	O60294	686 aa	Known RBP	13.59	□□□□□ -0.23
ABR-223	ENST00000573895	SNX3	O60493	162 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	DPM1	O60762	260 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	PRAMEF4	O60810	478 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	VPS4B	O75351	444 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	ULK1	O75385	1050 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	WISP1	O95388	367 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	SLC35G6	P0C7Q6	338 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	SERPINB1	P30740	379 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	AHR	P35869	848 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	BCL6	P41182	706 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	FOXL2	P58012	376 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	TLE1	Q04724	770 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	PWP1	Q13610	501 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	CATSPERE	Q5SY80	951 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	PRAMEF9	Q5VWM5	478 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	NIPAL1	Q6NVV3	410 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	MED27	Q6P2C8	311 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	IGFL3	Q6UXB1	125 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	SPATA21	Q7Z572	469 aa		13.59	□□□□□ -0.23
ABR-223	ENST00000573895	TMPRSS11B	Q86T26	416 aa		13.59	□□□□□ -0.23

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