RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CNR2P34972 360 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 RAB33AQ14088 237 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 CRB2Q5IJ48 1285 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 TOR1AIP1Q5JTV8 583 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 LHX8Q68G74 356 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 PTCHD4Q6ZW05 846 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 COMMD6Q7Z4G1 85 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 RAVER1Q8IY67 606 aaKnown RBP18.25■□□□□ 0.51
SCARF1-206ENST00000573852 KLHDC8AQ8IYD2 350 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 WDR48Q8TAF3 677 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 TMEM159Q96B96 161 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 CXorf40BQ96DE9 158 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 YME1L1Q96TA2 773 aa18.25■□□□□ 0.51
SCARF1-206ENST00000573852 SMG9Q9H0W8 520 aaKnown RBP18.25■□□□□ 0.51
SCARF1-206ENST00000573852 KIAA1671Q9BY89 1806 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 DOCK6Q96HP0 2047 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 ZAR1LA6NP61 321 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 CCRL2O00421 344 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 CATP04040 527 aaKnown RBP18.24■□□□□ 0.51
SCARF1-206ENST00000573852 FURINP09958 794 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 GJA1P17302 382 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 TCEA1P23193 301 aaKnown RBP18.24■□□□□ 0.51
SCARF1-206ENST00000573852 PDHA2P29803 388 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 DEFA1P59665 94 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 DEFA3P59666 94 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 LRRC74AQ0VAA2 488 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 KRR1Q13601 381 aaKnown RBP18.24■□□□□ 0.51
SCARF1-206ENST00000573852 ELOAQ14241 798 aaKnown RBP18.24■□□□□ 0.51
SCARF1-206ENST00000573852 MED27Q6P2C8 311 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 GDPD4Q6W3E5 623 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.24■□□□□ 0.51
SCARF1-206ENST00000573852 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.24■□□□□ 0.51
SCARF1-206ENST00000573852 WDR36Q8NI36 951 aaKnown RBP18.24■□□□□ 0.51
SCARF1-206ENST00000573852 TP63Q9H3D4 680 aaPredicted RBP18.24■□□□□ 0.51
SCARF1-206ENST00000573852 NEK6Q9HC98 313 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 RAB23Q9ULC3 237 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 CFL2Q9Y281 166 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 CCDC88CQ9P219 2028 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 LOC110117498-PIK3R3F6TDL0 507 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 KLHL18O94889 574 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 CTSAP10619 480 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 POU1F1P28069 291 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 PLAG1Q6DJT9 500 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 FRMPD2BQ6IN97 320 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 TCEAL8Q8IYN2 117 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 RASGEF1AQ8N9B8 481 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 PIK3R3Q92569 461 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 MAPKAP1Q9BPZ7 522 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 TAPBPLQ9BX59 468 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 EMILIN2Q9BXX0 1053 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 CNOT2Q9NZN8 540 aaKnown RBP18.24■□□□□ 0.51
SCARF1-206ENST00000573852 ENPP4Q9Y6X5 453 aa18.24■□□□□ 0.51
SCARF1-206ENST00000573852 TRBC2A0A5B9 178 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 SH3D21A4FU49 640 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 GPR37L1O60883 481 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 CCNKO75909 580 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 TGFB1P01137 390 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 TNFSF8P32971 234 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 CHI3L1P36222 383 aaPredicted RBP18.23■□□□□ 0.51
SCARF1-206ENST00000573852 CRISP1P54107 249 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 C2orf80Q0P641 193 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 UTS2BQ765I0 119 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 NINQ8N4C6 2090 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 OXR1Q8N573 874 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 WRAP53Q9BUR4 548 aaKnown RBP18.23■□□□□ 0.51
SCARF1-206ENST00000573852 OR51B5Q9H339 312 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 NMNAT1Q9HAN9 279 aaPredicted RBP18.23■□□□□ 0.51
SCARF1-206ENST00000573852 CLN6Q9NWW5 311 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 KCNE2Q9Y6J6 123 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 H3BQ06 376 aaPredicted RBP18.23■□□□□ 0.51
SCARF1-206ENST00000573852 APOA1P02647 267 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 SLC15A1P46059 708 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 PCBP3P57721 371 aaKnown RBP18.23■□□□□ 0.51
SCARF1-206ENST00000573852 COPZ1P61923 177 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 POLR2LP62875 67 aaKnown RBP18.23■□□□□ 0.51
SCARF1-206ENST00000573852 DUSP7Q16829 419 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 LEXMQ3ZCV2 418 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 AGAP6Q5VW22 663 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 TRIM40Q6P9F5 258 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 C16orf78Q8WTQ4 265 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 PPCDCQ96CD2 204 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 AGAP4Q96P64 663 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 OPALINQ96PE5 141 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 VPS35Q96QK1 796 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 IL4I1Q96RQ9 567 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 SLC30A2Q9BRI3 323 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 MOV10Q9HCE1 1003 aaKnown RBP18.23■□□□□ 0.51
SCARF1-206ENST00000573852 TBC1D24Q9ULP9 559 aa18.23■□□□□ 0.51
SCARF1-206ENST00000573852 SLC5A10A0PJK1 596 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 TSTA3Q13630 321 aaPredicted RBP18.22■□□□□ 0.51
SCARF1-206ENST00000573852 PDE7AQ13946 482 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 E2F2Q14209 437 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 TIMM50Q3ZCQ8 353 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 RSBN1Q5VWQ0 802 aaPredicted RBP18.22■□□□□ 0.51
SCARF1-206ENST00000573852 TRNT1Q96Q11 434 aaKnown RBP18.22■□□□□ 0.51
SCARF1-206ENST00000573852 CNPPD1Q9BV87 410 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 HHATLQ9HCP6 504 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 SLC25A13Q9UJS0 675 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 H3BM21 787 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 ENTPD6O75354 484 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms