RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 TMEM125Q96AQ2 219 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 MS4A6EQ96DS6 147 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 SMIM10Q96HG1 83 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 MAGED4Q96JG8 741 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 NPAS2Q99743 824 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 CCDC77Q9BR77 488 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 EFCAB11Q9BUY7 163 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 PITHD1Q9GZP4 211 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 AICDAQ9GZX7 198 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 TSPAN10Q9H1Z9 355 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 NMRAL1Q9HBL8 299 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 PRTFDC1Q9NRG1 225 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 NUDT4Q9NZJ9 180 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 OPTCQ9UBM4 332 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 FBXW2Q9UKT8 454 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 MMACHCQ9Y4U1 282 aa9.04□□□□□ -0.96
NPLOC4-212ENST00000573328 PCNX1Q96RV3 2341 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 ESYT3A0FGR9 886 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 LRIT2A6NDA9 550 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 UBXN8O00124 270 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 CCL21O00585 134 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 SH3BGRLO75368 114 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 SLC25A12O75746 678 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 IFNA16P05015 189 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 LTA4HP09960 611 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 SLC35E2BP0CK96 405 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 CRABP2P29373 138 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 GGT5P36269 586 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 DCTP40126 519 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 MSH2P43246 934 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 CYB561P49447 251 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 CLCN2P51788 898 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 MTTPP55157 894 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 SLC7A5Q01650 507 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 CHIT1Q13231 466 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 LAPTM5Q13571 262 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 BMPR2Q13873 1038 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 DOC2AQ14183 400 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 ZRSR2Q15696 482 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 CDKL4Q5MAI5 379 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 ADNP2Q6IQ32 1131 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 SLC25A25Q6KCM7 469 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 CYS1Q717R9 158 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 MYLK4Q86YV6 388 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 LGI4Q8N135 537 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 TMEM156Q8N614 296 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 B3GNT7Q8NFL0 401 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 SCMH1Q96GD3 660 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 SEC16BQ96JE7 1060 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 C16orf45Q96MC5 204 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 SERINC2Q96SA4 455 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 NPLQ9BXD5 320 aaPredicted RBP9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 CD244Q9BZW8 370 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 EHD1Q9H4M9 534 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 NT5DC2Q9H857 520 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 ANGPTL3Q9Y5C1 460 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 PCDHGB6Q9Y5F9 930 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 SPACA6W5XKT8 324 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 ITPR2Q14571 2701 aa9.03□□□□□ -0.96
NPLOC4-212ENST00000573328 IGKV3D-11A0A0A0MRZ8 115 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 SYCE1LA8MT33 242 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 PRSS44E7EML9 344 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 NPIPA5E9PKD4 350 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 KERAO60938 352 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 NEURL1O76050 574 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 URI1O94763 535 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 SP1P08047 785 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 ESRRAP11474 423 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 GFAPP14136 432 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF24P17028 368 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 PPP2R1BP30154 601 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 PHBP35232 272 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 ARL1P40616 181 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 SSR2P43308 183 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 KCNC1P48547 511 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 RAP1GDS1P52306 607 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 HNRNPFP52597 415 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 LIM2P55344 173 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 HSD17B7P56937 341 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 GUCY2DQ02846 1103 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 STX4Q12846 297 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 DDX39BQ13838 428 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 RUNX2Q13950 521 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 TRADDQ15628 312 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 MROH9Q5TGP6 573 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 ZDHHC24Q6UX98 284 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 SCUBE1Q8IWY4 988 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF595Q8IYB9 648 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 TMEM52Q8NDY8 209 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 SRFBP1Q8NEF9 429 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 KCTD4Q8WVF5 259 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 SREK1Q8WXA9 508 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF592Q92610 1267 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 UBE2E3Q969T4 207 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 NCLNQ969V3 563 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 VMP1Q96GC9 406 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 UBXN10Q96LJ8 280 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 GPR137Q96N19 417 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 KCNC2Q96PR1 638 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms