RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 METTL2BQ6P1Q9 378 aaKnown RBP16.21■□□□□ 0.19
SMG6-212ENST00000573153 SNX31Q8N9S9 440 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 IFT81Q8WYA0 676 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 SCMH1Q96GD3 660 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 PRDM7Q9NQW5 492 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 STMN3Q9NZ72 180 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 UNC79Q9P2D8 2635 aa16.21■□□□□ 0.19
SMG6-212ENST00000573153 A0A096LPK6 155 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 ANKDD1BA6NHY2 528 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 SAGE2PA6NJ88 616 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 K7EPI3 171 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 ERI3O43414 337 aaKnown RBP16.2■□□□□ 0.18
SMG6-212ENST00000573153 CCNT2O60583 730 aaKnown RBP16.2■□□□□ 0.18
SMG6-212ENST00000573153 PRAMEF2O60811 474 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 NEURL1O76050 574 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 ACSL3O95573 720 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 STSP08842 583 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 PPP2R1BP30154 601 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 CD96P40200 585 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 SERPINB9P50453 376 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 BTN3A2P78410 334 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 NAA30Q147X3 362 aaPredicted RBP16.2■□□□□ 0.18
SMG6-212ENST00000573153 ZGRF1Q86YA3 2104 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 LAS2Q8IYD9 372 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 LGI4Q8N135 537 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 BCORP1Q8N888 145 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 OR2L5Q8NG80 312 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 ZNF473Q8WTR7 871 aaKnown RBP16.2■□□□□ 0.18
SMG6-212ENST00000573153 PTCHD1Q96NR3 888 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 MS4A8Q9BY19 250 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 TRIM45Q9H8W5 580 aaPredicted RBP16.2■□□□□ 0.18
SMG6-212ENST00000573153 KCNK13Q9HB14 408 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 PRDM9Q9NQV7 894 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 OLAHQ9NV23 265 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 KCMF1Q9P0J7 381 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 ABI3Q9P2A4 366 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 ZNF180Q9UJW8 692 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 SLC5A6Q9Y289 635 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 MMACHCQ9Y4U1 282 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 PCDHGB6Q9Y5F9 930 aa16.2■□□□□ 0.18
SMG6-212ENST00000573153 A0A088AWK7 358 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 ASPDHA6ND91 283 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 LRRC14BA6NHZ5 514 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 A8MUI8 341 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 SUPT3HB4E1H0 165 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 CDK2AP1O14519 115 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 PRMT3O60678 531 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 SUPT3HO75486 399 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 SCELO95171 688 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 DDAH2O95865 285 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 ZNF10P21506 573 aaPredicted RBP16.19■□□□□ 0.18
SMG6-212ENST00000573153 CNTFP26441 200 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 CERS1P27544 350 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 TYK2P29597 1187 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 SERPINB1P30740 379 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 ALDH18A1P54886 795 aaKnown RBP16.19■□□□□ 0.18
SMG6-212ENST00000573153 RAB38P57729 211 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 IRF8Q02556 426 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 CHIT1Q13231 466 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 SETDB1Q15047 1291 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 FAM180AQ6UWF9 173 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 PLD6Q8N2A8 252 aaKnown RBP16.19■□□□□ 0.18
SMG6-212ENST00000573153 ADAMTS18Q8TE60 1221 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 EXT2Q93063 718 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 UBE2E3Q969T4 207 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 FAR2Q96K12 515 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 ZNF354BQ96LW1 612 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 F2RL3Q96RI0 385 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 PAFAH2Q99487 392 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 REXO4Q9GZR2 422 aaKnown RBP16.19■□□□□ 0.18
SMG6-212ENST00000573153 ANKRD10Q9NXR5 420 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 OPTCQ9UBM4 332 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 TEKT2Q9UIF3 430 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 TSC22D4Q9Y3Q8 395 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 SVILO95425 2214 aa16.19■□□□□ 0.18
SMG6-212ENST00000573153 SYNDIG1LA6NDD5 238 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 TMEM200CA6NKL6 621 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 INHBAP08476 426 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 ABHD2P08910 425 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 PLA2G16P53816 162 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 LIM2P55344 173 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 PCBP2Q15366 365 aaKnown RBP eCLIP16.18■□□□□ 0.18
SMG6-212ENST00000573153 UAP1Q16222 522 aaPredicted RBP16.18■□□□□ 0.18
SMG6-212ENST00000573153 HIST2H2ACQ16777 129 aaPredicted RBP16.18■□□□□ 0.18
SMG6-212ENST00000573153 MEP1AQ16819 746 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 C4orf17Q53FE4 359 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 HIST2H2AA3Q6FI13 130 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 KLC3Q6P597 504 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 TAOK1Q7L7X3 1001 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 RNF175Q8N4F7 328 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 DCAKDQ8WVC6 231 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 MRRFQ96E11 262 aaKnown RBP16.18■□□□□ 0.18
SMG6-212ENST00000573153 ZNF717Q9BY31 904 aaPredicted RBP16.18■□□□□ 0.18
SMG6-212ENST00000573153 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.18■□□□□ 0.18
SMG6-212ENST00000573153 DAPP1Q9UN19 280 aa16.18■□□□□ 0.18
SMG6-212ENST00000573153 A0A087WUV0 522 aaPredicted RBP16.17■□□□□ 0.18
SMG6-212ENST00000573153 A1L4Q6 167 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 GABRR3A8MPY1 467 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 PSMD12O00232 456 aaPredicted RBP16.17■□□□□ 0.18
SMG6-212ENST00000573153 PRKNO60260 465 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms