RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 ITLN2Q8WWU7 325 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-207ENST00000572346 SLC5A11Q8WWX8 675 aa13.96□□□□□ -0.17
NPLOC4-207ENST00000572346 IMMP1LQ96LU5 166 aa13.96□□□□□ -0.17
NPLOC4-207ENST00000572346 TUBB6Q9BUF5 446 aa13.96□□□□□ -0.17
NPLOC4-207ENST00000572346 KCNK9Q9NPC2 374 aa13.96□□□□□ -0.17
NPLOC4-207ENST00000572346 MKS1Q9NXB0 559 aa13.96□□□□□ -0.17
NPLOC4-207ENST00000572346 ABI3Q9P2A4 366 aa13.96□□□□□ -0.17
NPLOC4-207ENST00000572346 TEP1Q99973 2627 aaKnown RBP13.96□□□□□ -0.17
NPLOC4-207ENST00000572346 CSMD1Q96PZ7 3565 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 TRGV8A0A0C4DH27 118 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 OR5H15A6NDH6 313 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 STX16-NPEPL1H3BU86 382 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 H7BY64 318 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 K7EPI3 171 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 STX16O14662 325 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 KLK8O60259 260 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 PLIN3O60664 434 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 CRYABP02511 175 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 PROCP04070 461 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 C8orf89P0DMQ9 161 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 CDH1P12830 882 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 CREB1P16220 341 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 GNAZP19086 355 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 ATP5F1P24539 256 aaPredicted RBP13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 ELAVL4P26378 380 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 GRNP28799 593 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 GRK3P35626 688 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 PDK4Q16654 411 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 TMPRSS11BQ86T26 416 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 SLC22A9Q8IVM8 553 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 KLHDC8AQ8IYD2 350 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 ARMC2Q8NEN0 867 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 DNAJB8Q8NHS0 232 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 SUN3Q8TAQ9 357 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 TCP10LQ8TDR4 215 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 UBTD2Q8WUN7 234 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 CCDC126Q96EE4 140 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 MOCOSQ96EN8 888 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 CCDC120Q96HB5 630 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 PRAP1Q96NZ9 151 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 OR4K3Q96R72 315 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 PRM3Q9NNZ6 103 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 TMEM184CQ9NVA4 438 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 STMN3Q9NZ72 180 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 SEC14L3Q9UDX4 400 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 EMCNQ9ULC0 261 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 PLLPQ9Y342 182 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 KLF2Q9Y5W3 355 aaPredicted RBP13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 ACTL7BQ9Y614 415 aa13.95□□□□□ -0.18
NPLOC4-207ENST00000572346 A8MT66 165 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 CCL21O00585 134 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 DLX3O60479 287 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 PRAMEF2O60811 474 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 H2AFYO75367 372 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 SIX3O95343 332 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 STATHP02808 62 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 SBK3P0C264 359 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 CPA3P15088 417 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 EPB42P16452 691 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 EEF1DP29692 281 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 ARL1P40616 181 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 CA7P43166 264 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 AVPR1BP47901 424 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 PIK3CGP48736 1102 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 CCR8P51685 355 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 ZNF33BQ06732 778 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 PCBP2Q15366 365 aaKnown RBP eCLIP13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 NDUFA9Q16795 377 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 TNFAIP8L3Q5GJ75 292 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 AGBL2Q5U5Z8 902 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 LANCL3Q6ZV70 420 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 SHISA5Q8N114 240 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 TMEM151AQ8N4L1 468 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 TBC1D19Q8N5T2 526 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 TEX9Q8N6V9 391 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 OR9A4Q8NGU2 314 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 RDH11Q8TC12 318 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 METTL21AQ8WXB1 218 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 NEIL2Q969S2 332 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 ATP6V1E2Q96A05 226 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 PKNOX2Q96KN3 472 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 FAM111AQ96PZ2 611 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 PCNX1Q96RV3 2341 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 VN1R1Q9GZP7 353 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 C12orf65Q9H3J6 166 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 RUBCNLQ9H714 662 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 SSU72Q9NP77 194 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 GPRC5BQ9NZH0 403 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 SUCOQ9UBS9 1254 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 SH2B3Q9UQQ2 575 aa13.94□□□□□ -0.18
NPLOC4-207ENST00000572346 SCN3AQ9NY46 2000 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 PKDREJQ9NTG1 2253 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 IGHV3-20A0A0C4DH32 117 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 H0YIG0 161 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 SEC24DO94855 1032 aaPredicted RBP13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 NSA2O95478 260 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 MAGOHP61326 146 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 PMP22Q01453 160 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 IRF8Q02556 426 aa13.93□□□□□ -0.18
NPLOC4-207ENST00000572346 GTF2H2Q13888 395 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms