RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 SIX3O95343 332 aaPredicted RBP13.67□□□□□ -0.22
LITAF-208ENST00000571627 SHBGP04278 402 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 GSTA1P08263 222 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 PCNAP12004 261 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 CERS1P27544 350 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 OR4D2P58180 307 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 ACTN3Q08043 901 aaPredicted RBP13.67□□□□□ -0.22
LITAF-208ENST00000571627 E2F2Q14209 437 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 ZNF169Q14929 603 aaPredicted RBP13.67□□□□□ -0.22
LITAF-208ENST00000571627 ADPRMQ3LIE5 342 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 FCRLBQ6BAA4 426 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 PLAG1Q6DJT9 500 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 MYLK4Q86YV6 388 aaPredicted RBP13.67□□□□□ -0.22
LITAF-208ENST00000571627 RNF175Q8N4F7 328 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 PTGR2Q8N8N7 351 aaPredicted RBP13.67□□□□□ -0.22
LITAF-208ENST00000571627 PLPP5Q8NEB5 264 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 OR2L5Q8NG80 312 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 MZB1Q8WU39 189 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 CAVIN3Q969G5 261 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 PTCHD1Q96NR3 888 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 QRFPRQ96P65 431 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 LMF1Q96S06 567 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 PARD6BQ9BYG5 372 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 CLK4Q9HAZ1 481 aaKnown RBP13.67□□□□□ -0.22
LITAF-208ENST00000571627 NECTIN3Q9NQS3 549 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 VPS4AQ9UN37 437 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 SVILO95425 2214 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 UTP20O75691 2785 aaKnown RBP13.66□□□□□ -0.22
LITAF-208ENST00000571627 A8MUI8 341 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 TCP11X1B4DZS4 312 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 CDH16O75309 829 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 NUDT17P0C025 328 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 ICAM2P13598 275 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 TAC1P20366 129 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 DEKP35659 375 aaKnown RBP13.66□□□□□ -0.22
LITAF-208ENST00000571627 ST13P50502 369 aaKnown RBP13.66□□□□□ -0.22
LITAF-208ENST00000571627 ARG2P78540 354 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 ZNF33BQ06732 778 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 MED27Q6P2C8 311 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 TRIM40Q6P9F5 258 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 ABHD17CQ6PCB6 329 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 QSOX2Q6ZRP7 698 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 GOLGA7Q7Z5G4 137 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 CYP4X1Q8N118 509 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 FAM47BQ8NA70 645 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 GALNT11Q8NCW6 608 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 TMEM52Q8NDY8 209 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 ZNF473Q8WTR7 871 aaKnown RBP13.66□□□□□ -0.22
LITAF-208ENST00000571627 LPAR4Q99677 370 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 MS4A8Q9BY19 250 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 DCDC2Q9UHG0 476 aa13.66□□□□□ -0.22
LITAF-208ENST00000571627 IGKV3D-11A0A0A0MRZ8 115 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 DYTNA2CJ06 578 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 A8MUA0 341 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 SAP18O00422 153 aaKnown RBP13.65□□□□□ -0.22
LITAF-208ENST00000571627 RTCAO00442 366 aaKnown RBP13.65□□□□□ -0.22
LITAF-208ENST00000571627 B3GALT2O43825 422 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 UGDHO60701 494 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 WDPCPO95876 746 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 PYGBP11216 843 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 KRT15P19012 456 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 EEF1DP29692 281 aaKnown RBP13.65□□□□□ -0.22
LITAF-208ENST00000571627 SERPINB1P30740 379 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 SLCO1A2P46721 670 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 HNRNPFP52597 415 aaKnown RBP13.65□□□□□ -0.22
LITAF-208ENST00000571627 SLC26A5P58743 744 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 AP2B1P63010 937 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 SRSF1Q07955 248 aaKnown RBP eCLIP13.65□□□□□ -0.22
LITAF-208ENST00000571627 IFFO1Q0D2I5 559 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 MRPL49Q13405 166 aaKnown RBP13.65□□□□□ -0.22
LITAF-208ENST00000571627 DDX39BQ13838 428 aaKnown RBP13.65□□□□□ -0.22
LITAF-208ENST00000571627 GTF2H2Q13888 395 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 TLR1Q15399 786 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 EXT1Q16394 746 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 ABHD17BQ5VST6 288 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 LIPJQ5W064 366 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 GRHL2Q6ISB3 625 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 GTF2H2CQ6P1K8 395 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 UBE3DQ7Z6J8 389 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 LAS2Q8IYD9 372 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 RIBC1Q8N443 379 aaPredicted RBP13.65□□□□□ -0.22
LITAF-208ENST00000571627 KIF2BQ8N4N8 673 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 OR7G3Q8NG95 312 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 OR1N1Q8NGS0 311 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 PHF21BQ96EK2 531 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 CSF3RQ99062 836 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 ROPN1BQ9BZX4 212 aaPredicted RBP13.65□□□□□ -0.22
LITAF-208ENST00000571627 ACTR8Q9H981 624 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 COPS7BQ9H9Q2 264 aaPredicted RBP13.65□□□□□ -0.22
LITAF-208ENST00000571627 ROPN1Q9HAT0 212 aaPredicted RBP13.65□□□□□ -0.22
LITAF-208ENST00000571627 KCNK13Q9HB14 408 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 PRDM9Q9NQV7 894 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 ADGRE2Q9UHX3 823 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 RAB21Q9UL25 225 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 COPG1Q9Y678 874 aaKnown RBP13.65□□□□□ -0.22
LITAF-208ENST00000571627 HIVEP3Q5T1R4 2406 aa13.65□□□□□ -0.22
LITAF-208ENST00000571627 A0A088AWK7 358 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 TCRBV16S1A1N1A0A5B0 115 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 SMIM23A6NLE4 172 aa13.64□□□□□ -0.23
LITAF-208ENST00000571627 TGFBR3LH3BV60 316 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms