RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 MTBPQ96DY7 904 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 PHF21BQ96EK2 531 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 C19orf60Q96EN9 201 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 KCNC2Q96PR1 638 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 MRPL46Q9H2W6 279 aaKnown RBP12.23□□□□□ -0.45
CNOT1-220ENST00000569916 IPPKQ9H8X2 491 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 ACTR8Q9H981 624 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 COPS7BQ9H9Q2 264 aaPredicted RBP12.23□□□□□ -0.45
CNOT1-220ENST00000569916 MMP25Q9NPA2 562 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 PLA2G3Q9NZ20 509 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 FETUBQ9UGM5 382 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 TMCO1Q9UM00 188 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 DAPP1Q9UN19 280 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 NTNG1Q9Y2I2 539 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 TSC22D4Q9Y3Q8 395 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 MMACHCQ9Y4U1 282 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 CLDN16Q9Y5I7 305 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 RELNP78509 3460 aa12.23□□□□□ -0.45
CNOT1-220ENST00000569916 H0YIV9 168 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 TGFBR3LH3BV60 316 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 RTCAO00442 366 aaKnown RBP12.22□□□□□ -0.45
CNOT1-220ENST00000569916 OR7A17O14581 309 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 UGDHO60701 494 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 SMIM24O75264 130 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 VPS4BO75351 444 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 SH3BGRLO75368 114 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 TGFB1P01137 390 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 UQCRHP07919 91 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 RPS17P08708 135 aaKnown RBP12.22□□□□□ -0.45
CNOT1-220ENST00000569916 TSFMP43897 325 aaKnown RBP12.22□□□□□ -0.45
CNOT1-220ENST00000569916 LIM2P55344 173 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 ARG2P78540 354 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 ACTN3Q08043 901 aaPredicted RBP12.22□□□□□ -0.45
CNOT1-220ENST00000569916 TGM3Q08188 693 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 TLR1Q15399 786 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 TMEM35AQ53FP2 167 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 KHDRBS2Q5VWX1 349 aaKnown RBP12.22□□□□□ -0.45
CNOT1-220ENST00000569916 H3F3CQ6NXT2 135 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 TMEM151AQ8N4L1 468 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 CISD2Q8N5K1 135 aaKnown RBP12.22□□□□□ -0.45
CNOT1-220ENST00000569916 L3MBTL4Q8NA19 623 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 FAM47BQ8NA70 645 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 CATSPER1Q8NEC5 780 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 SRFBP1Q8NEF9 429 aaKnown RBP12.22□□□□□ -0.45
CNOT1-220ENST00000569916 OR52B6Q8NGF0 335 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 HUS1BQ8NHY5 278 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 MZB1Q8WU39 189 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 HAS2Q92819 552 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 CMTM7Q96FZ5 175 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 NSUN5Q96P11 429 aaKnown RBP12.22□□□□□ -0.45
CNOT1-220ENST00000569916 CSF3RQ99062 836 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 NPAS2Q99743 824 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 MRPL57Q9BQC6 102 aaKnown RBP12.22□□□□□ -0.45
CNOT1-220ENST00000569916 TBCDQ9BTW9 1192 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 RNF32Q9H0A6 362 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 KCNK13Q9HB14 408 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 ZBTB26Q9HCK0 441 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 DMRT3Q9NQL9 472 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 ASF1BQ9NVP2 202 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 MAP10Q9P2G4 905 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 PSMC3IPQ9P2W1 217 aaPredicted RBP12.22□□□□□ -0.45
CNOT1-220ENST00000569916 PCTPQ9UKL6 214 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 VPS4AQ9UN37 437 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 PCDHGA11Q9Y5H2 935 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 NBASA2RRP1 2371 aa12.22□□□□□ -0.45
CNOT1-220ENST00000569916 IQANK1A0A1B0GTG1 560 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 DYTNA2CJ06 578 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 CLEC18AA5D8T8 446 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 SAGE2PA6NJ88 616 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 A8MT66 165 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 SAP18O00422 153 aaKnown RBP12.21□□□□□ -0.45
CNOT1-220ENST00000569916 CYR61O00622 381 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 SCELO95171 688 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 WDPCPO95876 746 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 F10P00742 488 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 GNLYP22749 145 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 ATP5A1P25705 553 aaKnown RBP12.21□□□□□ -0.45
CNOT1-220ENST00000569916 PIK3CBP42338 1070 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 TNFSF10P50591 281 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 HSD17B7P56937 341 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 ZNF33BQ06732 778 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 TRAF3Q13114 568 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 DDX39BQ13838 428 aaKnown RBP12.21□□□□□ -0.45
CNOT1-220ENST00000569916 DEPDC1Q5TB30 811 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 ABHD17BQ5VST6 288 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 FCRLBQ6BAA4 426 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 CLEC18BQ6UXF7 455 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 CRLF3Q8IUI8 442 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 ZNF595Q8IYB9 648 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 CYP4X1Q8N118 509 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 ACOT4Q8N9L9 421 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 CLEC18CQ8NCF0 446 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 ARMC2Q8NEN0 867 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 NFAM1Q8NET5 270 aaPredicted RBP12.21□□□□□ -0.45
CNOT1-220ENST00000569916 WDR20Q8TBZ3 569 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 ELP5Q8TE02 316 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 MAGEB10Q96LZ2 347 aaPredicted RBP12.21□□□□□ -0.45
CNOT1-220ENST00000569916 CDK15Q96Q40 435 aa12.21□□□□□ -0.45
CNOT1-220ENST00000569916 MTERF1Q99551 399 aaKnown RBP12.21□□□□□ -0.45
CNOT1-220ENST00000569916 BARD1Q99728 777 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms