RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 COLEC12Q5KU26 742 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 KHDRBS2Q5VWX1 349 aaKnown RBP12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 JMJD6Q6NYC1 403 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 EMBQ6PCB8 327 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 IGFL2Q6UWQ7 119 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 ISLR2Q6UXK2 745 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 OR52B6Q8NGF0 335 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 ADAMTS18Q8TE60 1221 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 TSLPQ969D9 159 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 PNPLA2Q96AD5 504 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 MTERF1Q99551 399 aaKnown RBP12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 LPAR4Q99677 370 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 WDR77Q9BQA1 342 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 CENPKQ9BS16 269 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 MFRPQ9BY79 579 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 EPS8L2Q9H6S3 715 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 ZBTB20Q9HC78 741 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 PRDM9Q9NQV7 894 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 PSD3Q9NYI0 1048 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 DAPP1Q9UN19 280 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 MMACHCQ9Y4U1 282 aa12.99□□□□□ -0.33
HERPUD1-218ENST00000569569 SHANK1Q9Y566 2161 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 GCN1Q92616 2671 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 BAHCC1Q9P281 2608 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 CLDN4O14493 209 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 SH3BGRLO75368 114 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 PTX3P26022 381 aaPredicted RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 CERS1P27544 350 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 TSFMP43897 325 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 CCT5P48643 541 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 ARFIP1P53367 373 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 LIM2P55344 173 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 OR4D2P58180 307 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 ZRSR2Q15696 482 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 EXT1Q16394 746 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 BTBD16Q32M84 506 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 SFT2D3Q587I9 215 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 SLC6A19Q695T7 634 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 PLAG1Q6DJT9 500 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 PAPD4Q6PIY7 484 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 SH2D5Q6ZV89 423 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 UBE3DQ7Z6J8 389 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 MILR1Q7Z6M3 343 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 SLC22A9Q8IVM8 553 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 CYP4X1Q8N118 509 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 RNF175Q8N4F7 328 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 ACOT4Q8N9L9 421 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 ARMC2Q8NEN0 867 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 WDR20Q8TBZ3 569 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 M1APQ8TC57 530 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 BRIX1Q8TDN6 353 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 EPS8L3Q8TE67 593 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 ZNF483Q8TF39 744 aaPredicted RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 AENQ8WTP8 325 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 PSMF1Q92530 271 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 RGMAQ96B86 450 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 MAGEB10Q96LZ2 347 aaPredicted RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 NSUN5Q96P11 429 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 CDK15Q96Q40 435 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 OR51B5Q9H339 312 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 LYRM4Q9HD34 91 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 SEMA4BQ9NPR2 832 aaPredicted RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 SLAMF7Q9NQ25 335 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 DMRT3Q9NQL9 472 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 PPT2Q9UMR5 302 aa12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 MRPS33Q9Y291 106 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 V9GYY5 206 aaPredicted RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 PRRC2CQ9Y520 2896 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-218ENST00000569569 TCRBV16S1A1N1A0A5B0 115 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 SMIM23A6NLE4 172 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 TTLL8A6PVC2 850 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 FOXE1O00358 373 aaPredicted RBP12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 RTCAO00442 366 aaKnown RBP12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 DLX3O60479 287 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 GLRA3O75311 464 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 OTCP00480 354 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 CELA2AP08217 269 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 NUDT17P0C025 328 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 ITGAMP11215 1152 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 IMPDH1P20839 514 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 MAOAP21397 527 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 HIST1H1TP22492 207 aaPredicted RBP12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 ATP5F1P24539 256 aaPredicted RBP12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 ATP5A1P25705 553 aaKnown RBP12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 CD97P48960 835 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 RAP1GDS1P52306 607 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 CDH13P55290 713 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 HSD17B7P56937 341 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 RPS13P62277 151 aaKnown RBP12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 HERVK_113P63132 956 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 TRAF3Q13114 568 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 MFAP5Q13361 173 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 CUL3Q13618 768 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 ERCC6LQ2NKX8 1250 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 PLEKHN1Q494U1 663 aaPredicted RBP12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 GGTA1PQ4G0N0 100 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 ZNF678Q5SXM1 525 aa12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 C10orf62Q5T681 223 aaPredicted RBP12.97□□□□□ -0.33
HERPUD1-218ENST00000569569 OR4C11Q6IEV9 310 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms