RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 OR7G3Q8NG95 312 aa16.45■□□□□ 0.22
EDC3-215ENST00000569007 ZNF473Q8WTR7 871 aaKnown RBP16.45■□□□□ 0.22
EDC3-215ENST00000569007 SERINC2Q96SA4 455 aa16.45■□□□□ 0.22
EDC3-215ENST00000569007 BARD1Q99728 777 aaKnown RBP16.45■□□□□ 0.22
EDC3-215ENST00000569007 MS4A8Q9BY19 250 aa16.45■□□□□ 0.22
EDC3-215ENST00000569007 COPS7BQ9H9Q2 264 aaPredicted RBP16.45■□□□□ 0.22
EDC3-215ENST00000569007 MMP25Q9NPA2 562 aa16.45■□□□□ 0.22
EDC3-215ENST00000569007 NECTIN3Q9NQS3 549 aa16.45■□□□□ 0.22
EDC3-215ENST00000569007 STMN3Q9NZ72 180 aa16.45■□□□□ 0.22
EDC3-215ENST00000569007 TRAV17A0A0B4J275 112 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 TCRBV16S1A1N1A0A5B0 115 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 SH3BGRLO75368 114 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 SIX3O95343 332 aaPredicted RBP16.44■□□□□ 0.22
EDC3-215ENST00000569007 FAM153BP0C7A2 387 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 HNRNPFP52597 415 aaKnown RBP16.44■□□□□ 0.22
EDC3-215ENST00000569007 MTTPP55157 894 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 PCBP2Q15366 365 aaKnown RBP eCLIP16.44■□□□□ 0.22
EDC3-215ENST00000569007 FAM153CQ494X1 144 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 ACER2Q5QJU3 275 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 GRHL2Q6ISB3 625 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 H3F3CQ6NXT2 135 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 UBE3DQ7Z6J8 389 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 MYLK4Q86YV6 388 aaPredicted RBP16.44■□□□□ 0.22
EDC3-215ENST00000569007 FAM26EQ8N5C1 309 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 PTGR2Q8N8N7 351 aaPredicted RBP16.44■□□□□ 0.22
EDC3-215ENST00000569007 FAM47BQ8NA70 645 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 TMEM52Q8NDY8 209 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 ARMC2Q8NEN0 867 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 GRHL3Q8TE85 626 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 SCYL1Q96KG9 808 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 KCNC2Q96PR1 638 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 RNF32Q9H0A6 362 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.44■□□□□ 0.22
EDC3-215ENST00000569007 ACTR8Q9H981 624 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 PRDM7Q9NQW5 492 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 AGPAT4Q9NRZ5 378 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 MMACHCQ9Y4U1 282 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 TNPO3Q9Y5L0 923 aaKnown RBP16.44■□□□□ 0.22
EDC3-215ENST00000569007 CPAMD8Q8IZJ3 1885 aa16.44■□□□□ 0.22
EDC3-215ENST00000569007 OR5H15A6NDH6 313 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 A8MUA0 341 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 TGFB1P01137 390 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 SNRPAP09012 282 aaKnown RBP16.43■□□□□ 0.22
EDC3-215ENST00000569007 RBP1P09455 135 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 COL6A2P12110 1019 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 LIM2P55344 173 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 RAB38P57729 211 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 DDX39BQ13838 428 aaKnown RBP16.43■□□□□ 0.22
EDC3-215ENST00000569007 GTF2H2Q13888 395 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 TSNAXIP1Q2TAA8 658 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 EIF2S3LQ2VIR3 472 aaKnown RBP16.43■□□□□ 0.22
EDC3-215ENST00000569007 TMEM35AQ53FP2 167 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 GTF2H2CQ6P1K8 395 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 CRLF3Q8IUI8 442 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 SCUBE1Q8IWY4 988 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 RNF175Q8N4F7 328 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 ADAMTS18Q8TE60 1221 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 ZNF354BQ96LW1 612 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 NPAS2Q99743 824 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 PRTFDC1Q9NRG1 225 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 XPR1Q9UBH6 696 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 HIVEP3Q5T1R4 2406 aa16.43■□□□□ 0.22
EDC3-215ENST00000569007 SAGE2PA6NJ88 616 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 TGFBR3LH3BV60 316 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 RTCAO00442 366 aaKnown RBP16.42■□□□□ 0.22
EDC3-215ENST00000569007 E2F3O00716 465 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 RIPK2O43353 540 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 MAN1A2O60476 641 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 CBX6O95503 412 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 GCAP28676 217 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 EEF1DP29692 281 aaKnown RBP16.42■□□□□ 0.22
EDC3-215ENST00000569007 SERPINB1P30740 379 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 PIK3CGP48736 1102 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 LIPJQ5W064 366 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 RPUSD3Q6P087 351 aaKnown RBP16.42■□□□□ 0.22
EDC3-215ENST00000569007 ZNF793Q6ZN11 406 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 CHSY3Q70JA7 882 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 GOLGA7Q7Z5G4 137 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 ZNF595Q8IYB9 648 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 GSPT2Q8IYD1 628 aaKnown RBP16.42■□□□□ 0.22
EDC3-215ENST00000569007 BEST3Q8N1M1 668 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 KIF2BQ8N4N8 673 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 SLC5A8Q8N695 610 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 ACOT4Q8N9L9 421 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 SRFBP1Q8NEF9 429 aaKnown RBP16.42■□□□□ 0.22
EDC3-215ENST00000569007 HUS1BQ8NHY5 278 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 ELP5Q8TE02 316 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 PHF21BQ96EK2 531 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 CMTM7Q96FZ5 175 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 CSF3RQ99062 836 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 TBCDQ9BTW9 1192 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 TXLNGYQ9BZA5 131 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 ROGDIQ9GZN7 287 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 IPPKQ9H8X2 491 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 DAPP1Q9UN19 280 aa16.42■□□□□ 0.22
EDC3-215ENST00000569007 MRPS33Q9Y291 106 aaKnown RBP16.42■□□□□ 0.22
EDC3-215ENST00000569007 UTP20O75691 2785 aaKnown RBP16.41■□□□□ 0.22
EDC3-215ENST00000569007 SAP18O00422 153 aaKnown RBP16.41■□□□□ 0.22
EDC3-215ENST00000569007 CYR61O00622 381 aa16.41■□□□□ 0.22
EDC3-215ENST00000569007 CLDN4O14493 209 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms