RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 CCDC59Q9P031 241 aaKnown RBP17.53■□□□□ 0.4
PKD1-235ENST00000568591 ITM2BQ9Y287 266 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 ALPK3Q96L96 1907 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 NEDD8-MDP1E9PL57 170 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 FFAR1O14842 300 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 URODP06132 367 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 OPRD1P41143 372 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 XCR1P46094 333 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 TAS2R50P59544 299 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 TBPL1P62380 186 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 ZNF45Q02386 682 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 RAB33AQ14088 237 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 TUBA3EQ6PEY2 450 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 C2orf73Q8N5S3 287 aaPredicted RBP17.53■□□□□ 0.4
PKD1-235ENST00000568591 CYB5D2Q8WUJ1 264 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 ZNF480Q8WV37 535 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 TRMT61AQ96FX7 289 aaKnown RBP17.53■□□□□ 0.4
PKD1-235ENST00000568591 SPATA9Q9BWV2 254 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 CORO2BQ9UQ03 480 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 OBSL1O75147 1896 aa17.53■□□□□ 0.4
PKD1-235ENST00000568591 TRBV4-1A0A0J9YWV2 114 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 WWP2O00308 870 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 TEX28O15482 410 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 ASNA1O43681 348 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 SEMA7AO75326 666 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 PTTG1O95997 202 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 PPIBP23284 216 aaKnown RBP17.52■□□□□ 0.4
PKD1-235ENST00000568591 CHI3L1P36222 383 aaPredicted RBP17.52■□□□□ 0.4
PKD1-235ENST00000568591 LIMS1P48059 325 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 ZNF763Q0D2J5 394 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 C2orf80Q0P641 193 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 SLBPQ14493 270 aaKnown RBP eCLIP17.52■□□□□ 0.4
PKD1-235ENST00000568591 PUM1Q14671 1186 aaKnown RBP eCLIP17.52■□□□□ 0.4
PKD1-235ENST00000568591 STARD3Q14849 445 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 UAP1L1Q3KQV9 507 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 SPIN4Q56A73 249 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 NXNL2Q5VZ03 156 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 SLC44A2Q8IWA5 706 aaPredicted RBP17.52■□□□□ 0.4
PKD1-235ENST00000568591 OR52N2Q8NGI0 321 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 OR56A3Q8NH54 315 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 PIP5K1AQ99755 562 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 WFDC6Q9BQY6 131 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 WRAP53Q9BUR4 548 aaKnown RBP17.52■□□□□ 0.4
PKD1-235ENST00000568591 ZNF556Q9HAH1 456 aa17.52■□□□□ 0.4
PKD1-235ENST00000568591 NMNAT1Q9HAN9 279 aaPredicted RBP17.52■□□□□ 0.4
PKD1-235ENST00000568591 ABT1Q9ULW3 272 aaKnown RBP17.52■□□□□ 0.4
PKD1-235ENST00000568591 TRBC2A0A5B9 178 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 LEFTY1O75610 366 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 GADD45GO95257 159 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 KLK1P06870 262 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 FURINP09958 794 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 CBLP22681 906 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 LIM2P55344 173 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 TMEM215Q68D42 235 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 PTCHD4Q6ZW05 846 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.52■□□□□ 0.39
PKD1-235ENST00000568591 TCEAL8Q8IYN2 117 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 MRPS31Q92665 395 aaKnown RBP17.52■□□□□ 0.39
PKD1-235ENST00000568591 TMEM169Q96HH4 297 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 NEDD4LQ96PU5 975 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 SLC46A2Q9BY10 475 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 CPEB1Q9BZB8 566 aaKnown RBP17.52■□□□□ 0.39
PKD1-235ENST00000568591 EXOSC4Q9NPD3 245 aaKnown RBP17.52■□□□□ 0.39
PKD1-235ENST00000568591 FTSJ1Q9UET6 329 aa17.52■□□□□ 0.39
PKD1-235ENST00000568591 LINC00854A0A1B0GVQ3 168 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 ENTPD6O75354 484 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 MED26O95402 600 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 SP3Q02447 781 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 MPP7Q5T2T1 576 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 MED27Q6P2C8 311 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 LSRQ86X29 649 aaPredicted RBP17.51■□□□□ 0.39
PKD1-235ENST00000568591 DEPDC4Q8N2C3 294 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 CPXM2Q8N436 756 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 IL17RDQ8NFM7 739 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 CD99L2Q8TCZ2 262 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 CNPPD1Q9BV87 410 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 BARHL1Q9BZE3 327 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 NUAK2Q9H093 628 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 DNAJC27Q9NZQ0 273 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 SRRDQ9UH36 339 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 HCN4Q9Y3Q4 1203 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 H3BQ06 376 aaPredicted RBP17.51■□□□□ 0.39
PKD1-235ENST00000568591 CTSLP07711 333 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 NPPBP16860 134 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 KCNC3Q14003 757 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 FBXO43Q4G163 708 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 BCL7AQ4VC05 210 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 ARSIQ5FYB1 569 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 HENMT1Q5T8I9 393 aaKnown RBP17.51■□□□□ 0.39
PKD1-235ENST00000568591 CCDC190Q86UF4 302 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 CELF5Q8N6W0 485 aaKnown RBP17.51■□□□□ 0.39
PKD1-235ENST00000568591 PPCDCQ96CD2 204 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 OPALINQ96PE5 141 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 VPS35Q96QK1 796 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 CEP44Q9C0F1 390 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 BHLHE41Q9C0J9 482 aaPredicted RBP17.51■□□□□ 0.39
PKD1-235ENST00000568591 ABCG4Q9H172 646 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 TP63Q9H3D4 680 aaPredicted RBP17.51■□□□□ 0.39
PKD1-235ENST00000568591 THSD1Q9NS62 852 aa17.51■□□□□ 0.39
PKD1-235ENST00000568591 ATP6V1HQ9UI12 483 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms