RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 THAP3Q8WTV1 239 aaPredicted RBP13.99□□□□□ -0.17
CCNDBP1-213ENST00000568507 EXT2Q93063 718 aa13.99□□□□□ -0.17
CCNDBP1-213ENST00000568507 KIAA1191Q96A73 305 aa13.99□□□□□ -0.17
CCNDBP1-213ENST00000568507 ESAMQ96AP7 390 aa13.99□□□□□ -0.17
CCNDBP1-213ENST00000568507 PTCD3Q96EY7 689 aaKnown RBP13.99□□□□□ -0.17
CCNDBP1-213ENST00000568507 MAGED4Q96JG8 741 aa13.99□□□□□ -0.17
CCNDBP1-213ENST00000568507 GPR137Q96N19 417 aa13.99□□□□□ -0.17
CCNDBP1-213ENST00000568507 CCDC77Q9BR77 488 aa13.99□□□□□ -0.17
CCNDBP1-213ENST00000568507 EFCAB11Q9BUY7 163 aa13.99□□□□□ -0.17
CCNDBP1-213ENST00000568507 TSPAN10Q9H1Z9 355 aaPredicted RBP13.99□□□□□ -0.17
CCNDBP1-213ENST00000568507 FBXW2Q9UKT8 454 aa13.99□□□□□ -0.17
CCNDBP1-213ENST00000568507 NPIPA1Q9UND3 350 aa13.99□□□□□ -0.17
CCNDBP1-213ENST00000568507 TRBV11-1A0A0K0K1C0 115 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 HNRNPRO43390 633 aaKnown RBP13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 STX2P32856 288 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 TRHRP34981 398 aaPredicted RBP13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 MAGEA4P43358 317 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 HLCSP50747 726 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 MTTPP55157 894 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 HSD17B7P56937 341 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 GPX6P59796 221 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 IRF8Q02556 426 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 DOC2AQ14183 400 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 SLMAPQ14BN4 828 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 TERF2Q15554 542 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 ZKSCAN8Q15776 578 aaPredicted RBP13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 KBTBD12Q3ZCT8 623 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 MRGPRGQ86SM5 289 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 TBC1D1Q86TI0 1168 aaPredicted RBP13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 LURAP1LQ8IV03 231 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 FAM47BQ8NA70 645 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 CCDC120Q96HB5 630 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 UBXN10Q96LJ8 280 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 SERINC2Q96SA4 455 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 RUBCNLQ9H714 662 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 NMRAL1Q9HBL8 299 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 PTBP2Q9UKA9 531 aaKnown RBP13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 ZNF490Q9ULM2 529 aaPredicted RBP13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 ENTPD4Q9Y227 616 aa13.98□□□□□ -0.17
CCNDBP1-213ENST00000568507 ARHGAP10A1A4S6 786 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 SYNDIG1LA6NDD5 238 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 ASNA1O43681 348 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 NME2P1O60361 137 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 WISP2O76076 250 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 NME2P22392 152 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 CRABP2P29373 138 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 CHIT1Q13231 466 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 ART3Q13508 389 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 ADPRMQ3LIE5 342 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 ABHD17CQ6PCB6 329 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 RPTNQ6XPR3 784 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 VN1R5Q7Z5H4 357 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 SPPL2CQ8IUH8 684 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 TMEM156Q8N614 296 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 PDPRQ8NCN5 879 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 SRFBP1Q8NEF9 429 aaKnown RBP13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 FBXO25Q8TCJ0 367 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 FBF1Q8TES7 1133 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 ITLN2Q8WWU7 325 aaPredicted RBP13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 UBE2E3Q969T4 207 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 VMP1Q96GC9 406 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 FRMD6Q96NE9 622 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 QRFPRQ96P65 431 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 F2RL3Q96RI0 385 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 CD244Q9BZW8 370 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 PHACTR1Q9C0D0 580 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 ROGDIQ9GZN7 287 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 ALG9Q9H6U8 611 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 TRIM45Q9H8W5 580 aaPredicted RBP13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 CPAMD8Q8IZJ3 1885 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 SVILO95425 2214 aa13.97□□□□□ -0.17
CCNDBP1-213ENST00000568507 SUPT3HB4E1H0 165 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 KLRC4-KLRK1H3BQV0 150 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 PRAMEF4O60810 478 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 CTNSO60931 367 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 SUPT3HO75486 399 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 FAM155BO75949 473 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 IFNA16P05015 189 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 TFEBP19484 476 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 CERS1P27544 350 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 KCNC1P48547 511 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 LIM2P55344 173 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 ETF1P62495 437 aaKnown RBP13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 STX4Q12846 297 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 NAB1Q13506 487 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 BMPR2Q13873 1038 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 NAA30Q147X3 362 aaPredicted RBP13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 TBCCQ15814 346 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 C3AR1Q16581 482 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 PRAMEF9Q5VWM5 478 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 SYT10Q6XYQ8 523 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 LRRC70Q7Z2Q7 622 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 CLNKQ7Z7G1 428 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 SCUBE1Q8IWY4 988 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 GHDCQ8N2G8 530 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 TMEM132CQ8N3T6 1108 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 ZNF808Q8N4W9 903 aaPredicted RBP13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 CPSF7Q8N684 471 aaKnown RBP13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 NCLNQ969V3 563 aa13.96□□□□□ -0.17
CCNDBP1-213ENST00000568507 MARVELD3Q96A59 401 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms