RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 SLC35G6P0C7Q6 338 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ACADSP16219 412 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 CERS1P27544 350 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 AQP1P29972 269 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 AHRP35869 848 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 BTN3A2P78410 334 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 CHRNB3Q05901 458 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 PRSS53Q2L4Q9 553 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 MPEG1Q2M385 716 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 FAM98BQ52LJ0 330 aaKnown RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 NDUFAF5Q5TEU4 345 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 HMBOX1Q6NT76 420 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 FIGLAQ6QHK4 219 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ENPP6Q6UWR7 440 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 TMEM26Q6ZUK4 368 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 IKBIPQ70UQ0 350 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ERMP1Q7Z2K6 904 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ZNF551Q7Z340 670 aaPredicted RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 CAMKMTQ7Z624 323 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 PAQR7Q86WK9 346 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 PDSS2Q86YH6 399 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 DCP2Q8IU60 420 aaKnown RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 TRIML2Q8N7C3 387 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 MFSD9Q8NBP5 474 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 RSC1A1Q92681 617 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 MAL2Q969L2 176 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 VPS50Q96JG6 964 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 KCNC2Q96PR1 638 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 CHID1Q9BWS9 393 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 AICDAQ9GZX7 198 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ARMC1Q9NVT9 282 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 MAP4K5Q9Y4K4 846 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 PCDHGA2Q9Y5H1 932 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ASXL3Q9C0F0 2248 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 RNF103-CHMP3A0A140T963 221 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 FAM220BPB1ANY3 271 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 C4orf51C9J302 202 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 CTSVO60911 334 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 CREG1O75629 220 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 PRKD3O94806 890 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 PDGFBP01127 241 aaPredicted RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 NUDT7P0C024 238 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 FAM58BPP0C7Q3 252 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 UMPSP11172 480 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 HIST1H1TP22492 207 aaPredicted RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 C21orf59P57076 290 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 STXBP1P61764 594 aaKnown RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 RPS15AP62244 130 aaKnown RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 UBE2IP63279 158 aaKnown RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 RGS1Q08116 209 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 C16orf72Q14CZ0 275 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 TMEM35AQ53FP2 167 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 FBXO42Q6P3S6 717 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 SPESP1Q6UW49 350 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ZBTB49Q6ZSB9 765 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ASPGQ86U10 573 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 OOSP2Q86WS3 158 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 GKN2Q86XP6 184 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 FAM86B1Q8N7N1 296 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ACOT4Q8N9L9 421 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 FAM47BQ8NA70 645 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 SRFBP1Q8NEF9 429 aaKnown RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 ADCY4Q8NFM4 1077 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 OR2L5Q8NG80 312 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 FAM174AQ8TBP5 190 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 RERGQ96A58 199 aaPredicted RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 CLDN23Q96B33 292 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 REXO5Q96IC2 774 aaKnown RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 DDX31Q9H8H2 851 aaKnown RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 COQ10BQ9H8M1 238 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 GPR27Q9NS67 375 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 TAS2R9Q9NYW1 312 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 THEGQ9P2T0 379 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 PADI4Q9UM07 663 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 FAF1Q9UNN5 650 aaPredicted RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 LRCH1Q9Y2L9 728 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 NINQ8N4C6 2090 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 A0A1W2PR77 199 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 PDLIM1O00151 329 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 PDPK1O15530 556 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 SCELO95171 688 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 KCNK5O95279 499 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 C9P02748 559 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 NME1P15531 152 aaKnown RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 HOXB9P17482 250 aaPredicted RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 ATP5A1P25705 553 aaKnown RBP6.72□□□□□ -1.33
SMG1-215ENST00000568239 PTGER1P34995 402 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 GPC1P35052 558 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 PRIM2P49643 509 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 HYAL2Q12891 473 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 PDE7AQ13946 482 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 RGNQ15493 299 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ZIC1Q15915 447 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 VMACQ2NL98 169 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 SPDYE7PQ495Y7 208 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 IRGCQ6NXR0 463 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 ABHD17CQ6PCB6 329 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 SLC36A4Q6YBV0 504 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 SERPINA11Q86U17 422 aa6.72□□□□□ -1.33
SMG1-215ENST00000568239 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms