RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 OR11G2Q8NGC1 345 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 APOBEC4Q8WW27 367 aaKnown RBP11.7□□□□□ -0.54
RNF40-211ENST00000567365 CCT6BQ92526 530 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 ATP6V1E2Q96A05 226 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 TLCD1Q96CP7 247 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 REPS1Q96D71 796 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 PEX11GQ96HA9 241 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 KCNC2Q96PR1 638 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 SERINC2Q96SA4 455 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 WDR77Q9BQA1 342 aaPredicted RBP11.7□□□□□ -0.54
RNF40-211ENST00000567365 TBCDQ9BTW9 1192 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 MLXIPLQ9NP71 852 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 TNFRSF12AQ9NP84 129 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 TUBD1Q9UJT1 453 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 MID2Q9UJV3 735 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 DAPP1Q9UN19 280 aa11.7□□□□□ -0.54
RNF40-211ENST00000567365 GCN1Q92616 2671 aaKnown RBP11.69□□□□□ -0.54
RNF40-211ENST00000567365 IGKV3D-11A0A0A0MRZ8 115 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 SERTM1A2A2V5 107 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 CYSRT1A8MQ03 144 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 CYR61O00622 381 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 TRIM13O60858 407 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 ALOX12BO75342 701 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 COX6A1P12074 109 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 RNH1P13489 461 aaKnown RBP11.69□□□□□ -0.54
RNF40-211ENST00000567365 PLA2G2AP14555 144 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 HIST1H1TP22492 207 aaPredicted RBP11.69□□□□□ -0.54
RNF40-211ENST00000567365 ALDH3A1P30838 453 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 ARRB2P32121 409 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 POLE2P56282 527 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 DDX39BQ13838 428 aaKnown RBP11.69□□□□□ -0.54
RNF40-211ENST00000567365 RBBP7Q16576 425 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 DCAF10Q5QP82 559 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 QSOX2Q6ZRP7 698 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 ZCCHC7Q8N3Z6 543 aaKnown RBP11.69□□□□□ -0.54
RNF40-211ENST00000567365 ACOT4Q8N9L9 421 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 TMEM52Q8NDY8 209 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 PPP4R1Q8TF05 950 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 SORBS1Q9BX66 1292 aaKnown RBP11.69□□□□□ -0.54
RNF40-211ENST00000567365 SLC29A3Q9BZD2 475 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 SEMA4CQ9C0C4 833 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 ING2Q9H160 280 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 ADNPQ9H2P0 1102 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 DDX31Q9H8H2 851 aaKnown RBP11.69□□□□□ -0.54
RNF40-211ENST00000567365 BRF2Q9HAW0 419 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 TMBIM4Q9HC24 238 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 FARSBQ9NSD9 589 aaKnown RBP11.69□□□□□ -0.54
RNF40-211ENST00000567365 MKL2Q9ULH7 1088 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 STK38LQ9Y2H1 464 aa11.69□□□□□ -0.54
RNF40-211ENST00000567365 A0A0A6YYD5 115 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 ARGFXA6NJG6 315 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 FAM227AF5H4B4 570 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 H3BQF6 201 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 TGFBR3LH3BV60 316 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 MASP2O00187 686 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 MANBAO00462 879 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 B3GALT2O43825 422 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 SH3BGRLO75368 114 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 DNAJB5O75953 348 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 PDYNP01213 254 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 ENO1P06733 434 aaKnown RBP11.68□□□□□ -0.54
RNF40-211ENST00000567365 HEXBP07686 556 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 BPGMP07738 259 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 FAM87AP0C7U9 286 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 HTR6P50406 440 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 HNRNPFP52597 415 aaKnown RBP11.68□□□□□ -0.54
RNF40-211ENST00000567365 FOXA1P55317 472 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 LIM2P55344 173 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 RAB38P57729 211 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 ZNF33BQ06732 778 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 TGM3Q08188 693 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 Q0VFX4 171 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 GALNT1Q10472 559 aaPredicted RBP11.68□□□□□ -0.54
RNF40-211ENST00000567365 TBL3Q12788 808 aaKnown RBP11.68□□□□□ -0.54
RNF40-211ENST00000567365 CHAF1BQ13112 559 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 PCOLCEQ15113 449 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 CES4AQ5XG92 561 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 OR4C11Q6IEV9 310 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 SCUBE1Q8IWY4 988 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 CCNYL1Q8N7R7 359 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 CDYL2Q8N8U2 506 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 RGMAQ96B86 450 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 ZBTB9Q96C00 473 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 C8orf44Q96CB5 159 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 C11orf24Q96F05 449 aaPredicted RBP11.68□□□□□ -0.54
RNF40-211ENST00000567365 FAR2Q96K12 515 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 IMMP1LQ96LU5 166 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 KCNA7Q96RP8 456 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 SERPINI1Q99574 410 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 MAPKAP1Q9BPZ7 522 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 TRMOQ9BU70 441 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 MECRQ9BV79 373 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 YIPF2Q9BWQ6 316 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 ROGDIQ9GZN7 287 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 IQCGQ9H095 443 aaKnown RBP11.68□□□□□ -0.54
RNF40-211ENST00000567365 ZNF700Q9H0M5 742 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 LYRM4Q9HD34 91 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 FBXL4Q9UKA2 621 aa11.68□□□□□ -0.54
RNF40-211ENST00000567365 A0A088AWK7 358 aa11.67□□□□□ -0.54
RNF40-211ENST00000567365 IGHV1-45A0A0A0MS14 117 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms