RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 EFCAB11Q9BUY7 163 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 NPLQ9BXD5 320 aaPredicted RBP13.72□□□□□ -0.21
FANCA-220ENST00000566409 REXO4Q9GZR2 422 aaKnown RBP13.72□□□□□ -0.21
FANCA-220ENST00000566409 NUDT4Q9NZJ9 180 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 OSGIN2Q9Y236 505 aa13.72□□□□□ -0.21
FANCA-220ENST00000566409 CACNA1DQ01668 2161 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 A1L4Q6 167 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 LRRC14BA6NHZ5 514 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 SAGE2PA6NJ88 616 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 SUPT3HB4E1H0 165 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 PSMD12O00232 456 aaPredicted RBP13.71□□□□□ -0.21
FANCA-220ENST00000566409 CYR61O00622 381 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 SUPT3HO75486 399 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 CLDN1O95832 211 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 DDAH2O95865 285 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 ALDOAP04075 364 aaKnown RBP13.71□□□□□ -0.21
FANCA-220ENST00000566409 S100BP04271 92 aaPredicted RBP13.71□□□□□ -0.21
FANCA-220ENST00000566409 CERS1P27544 350 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 PPP2R1BP30154 601 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 KCNK10P57789 538 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 IRF8Q02556 426 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 PCDH1Q08174 1060 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 GTF3C1Q12789 2109 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 ZNF766Q5HY98 468 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 LRRC70Q7Z2Q7 622 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 RPS19BP1Q86WX3 136 aaKnown RBP13.71□□□□□ -0.21
FANCA-220ENST00000566409 ZNF227Q86WZ6 799 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 LAS2Q8IYD9 372 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 ZNF473Q8WTR7 871 aaKnown RBP13.71□□□□□ -0.21
FANCA-220ENST00000566409 ZNF592Q92610 1267 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 CSF3RQ99062 836 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 FUT8Q9BYC5 575 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 CDCP1Q9H5V8 836 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 ACSS3Q9H6R3 686 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 SNX15Q9NRS6 342 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 KCMF1Q9P0J7 381 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 MMACHCQ9Y4U1 282 aa13.71□□□□□ -0.21
FANCA-220ENST00000566409 A0A096LPK6 155 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 GABRR3A8MPY1 467 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 K7EPI3 171 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 LRRTM2O43300 516 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 B3GALT2O43825 422 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 NEURL1O76050 574 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 RASAL1O95294 804 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 MSH2P43246 934 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 GPR143P51810 404 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 LIM2P55344 173 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 RAB38P57729 211 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 OR1C1Q15619 314 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 C4orf17Q53FE4 359 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 ZNF793Q6ZN11 406 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 PLD6Q8N2A8 252 aaKnown RBP13.7□□□□□ -0.22
FANCA-220ENST00000566409 RNF175Q8N4F7 328 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 SLC5A8Q8N695 610 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 FAM47BQ8NA70 645 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 APCDD1LQ8NCL9 501 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 OR7G3Q8NG95 312 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 RHEBL1Q8TAI7 183 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 SCMH1Q96GD3 660 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 C5orf34Q96MH7 638 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 UTP23Q9BRU9 249 aaKnown RBP13.7□□□□□ -0.22
FANCA-220ENST00000566409 MS4A8Q9BY19 250 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 CDC42EP4Q9H3Q1 356 aaKnown RBP13.7□□□□□ -0.22
FANCA-220ENST00000566409 ABI3Q9P2A4 366 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 ZNF223Q9UK11 482 aaPredicted RBP13.7□□□□□ -0.22
FANCA-220ENST00000566409 DAPP1Q9UN19 280 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 PCDHGB6Q9Y5F9 930 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 LRBAP50851 2863 aa13.7□□□□□ -0.22
FANCA-220ENST00000566409 A0A087X1B8 175 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 RTCAO00442 366 aaKnown RBP13.69□□□□□ -0.22
FANCA-220ENST00000566409 KLK8O60259 260 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 SH3BGRLO75368 114 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 KLHL2O95198 593 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 ACSL3O95573 720 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 STSP08842 583 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 COL8A1P27658 744 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 TPP2P29144 1249 aaPredicted RBP13.69□□□□□ -0.22
FANCA-220ENST00000566409 MTTPP55157 894 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 HSD17B7P56937 341 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 MLF1P58340 268 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 LAPTM5Q13571 262 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 UAP1Q16222 522 aaPredicted RBP13.69□□□□□ -0.22
FANCA-220ENST00000566409 PAGE2BQ5JRK9 111 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 TRIM40Q6P9F5 258 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 LGI4Q8N135 537 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 ARMC10Q8N2F6 343 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 DNAJB8Q8NHS0 232 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 SUN3Q8TAQ9 357 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 IFT81Q8WYA0 676 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 SERINC2Q96SA4 455 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 KLHL1Q9NR64 748 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 PRTFDC1Q9NRG1 225 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 ZNF358Q9NW07 568 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 OPTCQ9UBM4 332 aa13.69□□□□□ -0.22
FANCA-220ENST00000566409 PPIEQ9UNP9 301 aaKnown RBP13.69□□□□□ -0.22
FANCA-220ENST00000566409 MYOCOSA0A1B0GUC4 107 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 MYO1DO94832 1006 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 TGFB1P01137 390 aa13.68□□□□□ -0.22
FANCA-220ENST00000566409 ATP5A1P25705 553 aaKnown RBP13.68□□□□□ -0.22
FANCA-220ENST00000566409 TYK2P29597 1187 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms