RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 TEX19Q8NA77 164 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 OR8J3Q8NGG0 315 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 MYLIPQ8WY64 445 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 NPLQ9BXD5 320 aaPredicted RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 SEC61A2Q9H9S3 476 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TIGARQ9NQ88 270 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TBC1D3DA0A087WVF3 549 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TBC1D3IA0A087WXS9 549 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TBC1D3EA0A087X179 549 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TBC1D3KA0A087X1G2 549 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TBC1D3FA6NER0 549 aaPredicted RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 TBC1D3LB9A6J9 549 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 FAAHO00519 579 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 UPK1BO75841 260 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TOXO94900 526 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TBC1D3HP0C7X1 549 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 ALPPL2P10696 532 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TPT1P13693 172 aaKnown RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 JAM2P57087 298 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TMEM41BQ5BJD5 291 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 PPP1R26Q5T8A7 1209 aaPredicted RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 TBC1D3GQ6DHY5 549 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TBC1D3CQ6IPX1 549 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 SLC8B1Q6J4K2 584 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 CEACAM20Q6UY09 585 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 MOB1BQ7L9L4 216 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 GPR149Q86SP6 731 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 ALDH16A1Q8IZ83 802 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TBC1D3Q8IZP1 549 aaPredicted RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 LILRB2Q8N423 598 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 DEC1Q9P2X7 70 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 VILLO15195 856 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 CNTN5O94779 1100 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 NTSR2O95665 410 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 RAC2P15153 192 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 CAMK2DQ13557 499 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TSTD2Q5T7W7 516 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 SERPINA9Q86WD7 417 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 FAM129CQ86XR2 697 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 LNX1Q8TBB1 728 aaPredicted RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 FANK1Q8TC84 345 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 DNAJC19Q96DA6 116 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 ALPK1Q96QP1 1244 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 CENPOQ9BU64 300 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 ACTL8Q9H568 366 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 MRM3Q9HC36 420 aaKnown RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 ZCCHC3Q9NUD5 404 aaKnown RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 MRPS23Q9Y3D9 190 aaKnown RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 CNTNAP1P78357 1384 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 GPR89AB7ZAQ6 455 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 AHSA1O95433 338 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 GPR89BP0CG08 455 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 SPHARQ15513 63 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 SGCBQ16585 318 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 SLC36A3Q495N2 470 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 FAM69AQ5T7M9 428 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 GPR157Q5UAW9 335 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 C12orf29Q8N999 325 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 OR8S1Q8NH09 359 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 SLC25A36Q96CQ1 311 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 ERLEC1Q96DZ1 483 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 OR2M4Q96R27 311 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TBX5Q99593 518 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 CCM2Q9BSQ5 444 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 SLC32A1Q9H598 525 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 B3GNT3Q9Y2A9 372 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 DENRO43583 198 aaKnown RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 PIAS1O75925 651 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 CELP19835 753 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 CD34P28906 385 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 ZNF41P51814 821 aaPredicted RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 RIDAP52758 137 aaKnown RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 TAS2R39P59534 338 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 C2orf76Q3KRA6 126 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 LIPKQ5VXJ0 399 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 CCBE1Q6UXH8 406 aaPredicted RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 GDPGP1Q6ZNW5 385 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 CACUL1Q86Y37 369 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 LRRC46Q96FV0 321 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 DNAJC27Q9NZQ0 273 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 OR6C65A6NJZ3 312 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 CLN5O75503 358 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 SBK2P0C263 348 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 GNB3P16520 340 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 ADRA1BP35368 520 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 CLRN1P58418 232 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 MC2RQ01718 297 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 MLC1Q15049 377 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TRAM1L1Q8N609 369 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 OR10T2Q8NGX3 314 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 GAL3ST1Q99999 423 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TSSK6Q9BXA6 273 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 PDGFDQ9GZP0 370 aaPredicted RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.92□□□□□ -1.62
SMG1-211ENST00000565324 MSRAQ9UJ68 235 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 PCDHB14Q9Y5E9 798 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 MYPNQ86TC9 1320 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 TLX2O43763 284 aaPredicted RBP4.92□□□□□ -1.62
SMG1-211ENST00000565324 PRAMEF2O60811 474 aa4.92□□□□□ -1.62
SMG1-211ENST00000565324 PSMD10O75832 226 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms