RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 NFKBIL1Q9UBC1 381 aaPredicted RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 MKLN1Q9UL63 735 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 ANGPT4Q9Y264 503 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 MAP4K5Q9Y4K4 846 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 PCDHGB6Q9Y5F9 930 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 NUP214P35658 2090 aaPredicted RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 UNC80Q8N2C7 3258 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 PRAMEF33A0A0G2JMD5 474 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 A0A1W2PRU2 124 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 ARRDC5A6NEK1 342 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 FOXE1O00358 373 aaPredicted RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 NRG2O14511 850 aaPredicted RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 PCDH17O14917 1159 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 TEX28O15482 410 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 ZW10O43264 779 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 ASNA1O43681 348 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 PRAMEF10O60809 474 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 PQBP1O60828 265 aaKnown RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 SNX4O95219 450 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 GADD45GO95257 159 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 KRT75O95678 551 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 GBAP04062 536 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 GSTT2P0CG29 244 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 GSTT2BP0CG30 244 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 POU2F1P14859 743 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 GJA1P17302 382 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 CBLP22681 906 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 PCYT1AP49585 367 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 HMGA2P52926 109 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 CRISP3P54108 245 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 PCBP3P57721 371 aaKnown RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 DEFA1P59665 94 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 DEFA3P59666 94 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 TBPL1P62380 186 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 C2orf80Q0P641 193 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 SLBPQ14493 270 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMG1-210ENST00000565224 PTGES3Q15185 160 aaKnown RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 SLC5A12Q1EHB4 618 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 CYP27C1Q4G0S4 372 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 SPANXN2Q5MJ10 180 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 DESI1Q6ICB0 168 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 SLC44A2Q8IWA5 706 aaPredicted RBP6.95□□□□□ -1.3
SMG1-210ENST00000565224 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMG1-210ENST00000565224 METTL4Q8N3J2 472 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 SDR16C5Q8N3Y7 309 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 AQP11Q8NBQ7 271 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 OR5AK3PQ8NH89 298 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 C16orf78Q8WTQ4 265 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 WDR34Q96EX3 536 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 VPS35Q96QK1 796 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 EFCAB11Q9BUY7 163 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 ROGDIQ9GZN7 287 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 TRIM39Q9HCM9 518 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 MYNNQ9NPC7 610 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 DMRT3Q9NQL9 472 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 CLN6Q9NWW5 311 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 TAS2R16Q9NYV7 291 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 TAS2R9Q9NYW1 312 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 FTSJ1Q9UET6 329 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 SLC6A14Q9UN76 642 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 CFL2Q9Y281 166 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 DYRK1BQ9Y463 629 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 ENPP4Q9Y6X5 453 aa6.95□□□□□ -1.3
SMG1-210ENST00000565224 COL4A6Q14031 1691 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 TRBC2A0A5B9 178 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 PIPSLA2A3N6 862 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 ZAR1LA6NP61 321 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 NEDD8-MDP1E9PL57 170 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 LOC110117498-PIK3R3F6TDL0 507 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 SAP18O00422 153 aaKnown RBP6.94□□□□□ -1.3
SMG1-210ENST00000565224 KIAA0513O60268 411 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 LEFTY1O75610 366 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 ARAFP10398 606 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 TIMP2P16035 220 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 RHCEP18577 417 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 PDHA2P29803 388 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 PBLDP30039 288 aaPredicted RBP6.94□□□□□ -1.3
SMG1-210ENST00000565224 SOAT1P35610 550 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 PIK3CBP42338 1070 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 CRISP1P54107 249 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 MC1RQ01726 317 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.94□□□□□ -1.3
SMG1-210ENST00000565224 GANABQ14697 944 aaKnown RBP6.94□□□□□ -1.3
SMG1-210ENST00000565224 MED22Q15528 200 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 TSTQ16762 297 aaKnown RBP6.94□□□□□ -1.3
SMG1-210ENST00000565224 MPEG1Q2M385 716 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 LRIT3Q3SXY7 679 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 DEPDC1Q5TB30 811 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 PLAG1Q6DJT9 500 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 FAM71E1Q6IPT2 247 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 C19orf48Q6RUI8 117 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 PTCHD4Q6ZW05 846 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 DDX53Q86TM3 631 aaKnown RBP6.94□□□□□ -1.3
SMG1-210ENST00000565224 CCDC190Q86UF4 302 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 ATCAYQ86WG3 371 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 TMEM25Q86YD3 366 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 SLC30A8Q8IWU4 369 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 LAS2Q8IYD9 372 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 CYP4Z2PQ8N1L4 340 aa6.94□□□□□ -1.3
SMG1-210ENST00000565224 WDR36Q8NI36 951 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms