RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 RPA4Q13156 261 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PWP1Q13610 501 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 AGKQ53H12 422 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 WASHC2DQ5SRD0 308 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CYB5R2Q6BCY4 276 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CRTC1Q6UUV9 634 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 UGT2A3Q6UWM9 527 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 LRRN1Q6UXK5 716 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PGAP1Q75T13 922 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ADCK1Q86TW2 530 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 GHDCQ8N2G8 530 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CPXM2Q8N436 756 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 OR4M2Q8NGB6 313 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 FGGYQ96C11 551 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ZBED6CLQ96FA7 236 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 IGSF21Q96ID5 467 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 DPH2Q9BQC3 489 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 FAM83CQ9BQN1 747 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PTGES2Q9H7Z7 377 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 RASSF1Q9NS23 344 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ZNF225Q9UK10 706 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SH2B3Q9UQQ2 575 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 RPL36Q9Y3U8 105 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 MAP4K5Q9Y4K4 846 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 RAI2Q9Y5P3 530 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 G3V2T6 193 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 TOR1AO14656 332 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 UBDO15205 165 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 NOBOXO60393 691 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 KLHL18O94889 574 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SLC25A14O95258 325 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 PLGP00747 810 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 GNAO1P09471 354 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 DHRS4L1P0CG22 281 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 TPSB2P20231 275 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 RFX3P48380 749 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 TPSAB1Q15661 275 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PARP6Q2NL67 630 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CXorf57Q6NSI4 855 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 TTC33Q6PID6 262 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 AFTPHQ6ULP2 937 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CHMP1BQ7LBR1 199 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 GALNT5Q7Z7M9 940 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SLITRK4Q8IW52 837 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 METTL27Q8N6F8 245 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 BPIFB1Q8TDL5 484 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 DACT3Q96B18 629 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 C1orf74Q96LT6 269 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 MARK1Q9P0L2 795 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 OPTCQ9UBM4 332 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 FBXO5Q9UKT4 447 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SLC12A4Q9UP95 1085 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 RNF11Q9Y3C5 154 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 FUOMA2VDF0 154 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 A8MT66 165 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SLC22A1O15245 554 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 LRRTM2O43300 516 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ZNF217O75362 1048 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CAPNS1P04632 268 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SYPP08247 313 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CDH3P22223 829 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 TCEA1P23193 301 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 HK3P52790 923 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CHRNA6Q15825 494 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SNAPC1Q16533 368 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 XKR4Q5GH76 650 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 MICU2Q8IYU8 434 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SPPL2AQ8TCT8 520 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 NAT6Q93015 286 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 LINGO1Q96FE5 620 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 LMF2Q9BU23 707 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 RBCK1Q9BYM8 510 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 OSGEPL1Q9H4B0 414 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SDHAF2Q9NX18 166 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 COMMD9Q9P000 198 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 KLHL13Q9P2N7 655 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CRLS1Q9UJA2 301 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ACSL5Q9ULC5 683 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 RNF112Q9ULX5 631 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 IFT52Q9Y366 437 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 NDUFAF1Q9Y375 327 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 FRMPD3Q5JV73 1810 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CIB4A0PJX0 185 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 FTCDNL1E5RQL4 147 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 STK25O00506 426 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SNPHO15079 494 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 GRID2O43424 1007 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PTGER3P43115 390 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 STT3AP46977 705 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CCR4P51679 360 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SLC7A2P52569 658 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CRISP1P54107 249 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 HERC3Q15034 1050 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 DHCR24Q15392 516 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ZXDCQ2QGD7 858 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 UGT3A2Q3SY77 523 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CARD16Q5EG05 197 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PRPF38BQ5VTL8 546 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 IL23RQ5VWK5 629 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 MEDAGQ5VYS4 303 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms