RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 GRIP1Q9Y3R0 1128 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SDC2P34741 201 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 PSPHP78330 225 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SCARB2Q14108 478 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 DUSP7Q16829 419 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TATDN3Q17R31 274 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 C5orf22Q49AR2 442 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CLLU1OSQ5K130 101 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 DPY19L3Q6ZPD9 716 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SIMC1Q8NDZ2 872 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 DENND6BQ8NEG7 585 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 C1GALT1C1Q96EU7 318 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CRELD1Q96HD1 420 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 HDHD5Q9BXW7 423 aa19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 NMNAT1Q9HAN9 279 aaPredicted RBP19.64■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TRBV4-1A0A0J9YWV2 114 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OR2AG2A6NM03 316 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ADAM12O43184 909 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 COCHO43405 550 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OAZ2O95190 189 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 FAM110CQ1W6H9 321 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 B3GLCTQ6Y288 498 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OTOP2Q7RTS6 562 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 APCDD1Q8J025 514 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 DNAJB8Q8NHS0 232 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 MTERF3Q96E29 417 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ACER3Q9NUN7 267 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ASIC5Q9NY37 505 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 NUMA1Q14980 2115 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 KCNE1BA0A087WTH5 132 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 A0A1B0GVC2 190 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 A6NIN4 97 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 NCR1O76036 304 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CELF2O95319 508 aaKnown RBP19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 LSM11P83369 360 aaKnown RBP eCLIP19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 NAE1Q13564 534 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 LARS2Q15031 903 aaKnown RBP19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 QPRTQ15274 297 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OR2G6Q5TZ20 316 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 AMIGO1Q86WK6 493 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 MMP21Q8N119 569 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 HJURPQ8NCD3 748 aaPredicted RBP19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 HCAR2Q8TDS4 363 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CCDC120Q96HB5 630 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 RAD9AQ99638 391 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 MIXL1Q9H2W2 232 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 RNF121Q9H920 327 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TMEM161AQ9NX61 479 aa19.63■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CD9P21926 228 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CSKP41240 450 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CRYBB2P43320 205 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 LIMK1P53667 647 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 MEF2AQ02078 507 aaPredicted RBP19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SAXO2Q658L1 398 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 FRMPD2BQ6IN97 320 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 PLET1Q6UQ28 207 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 USP30Q70CQ3 517 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OLIG3Q7RTU3 272 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 NPAS3Q8IXF0 933 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 NXPE1Q8N323 547 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 LILRA3Q8N6C8 439 aaPredicted RBP19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SLC35A5Q9BS91 424 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TVP23BQ9NYZ1 205 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 NDRG2Q9UN36 371 aaKnown RBP19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 LOC102723532A0A0G2JNH3 316 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 FAM25AB3EWG3 89 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 FAM25CB3EWG5 89 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 FAM25GB3EWG6 89 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 PLA2G10O15496 165 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ZNF623O75123 536 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ATF6P18850 670 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 P2RY14Q15391 338 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TAS1R1Q7RTX1 841 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 RTN4RL1Q86UN2 441 aaPredicted RBP19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 RBM45Q8IUH3 476 aaKnown RBP19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CSGALNACT1Q8TDX6 532 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OMA1Q96E52 524 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SGK2Q9HBY8 427 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 DNAJC11Q9NVH1 559 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 TMPRSS11EQ9UL52 423 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 NPIPB15A6NHN6 443 aaPredicted RBP19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OR10H3O60404 316 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 PSIP1O75475 530 aaKnown RBP19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ASGR1P07306 291 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CHI3L1P36222 383 aaPredicted RBP19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 OR3A3P47888 321 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CSNK1DP48730 415 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CRISP1P54107 249 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 PTPN5P54829 565 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 B4GALNT1Q00973 533 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 BCL2L1Q07817 233 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 MTAPQ13126 283 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 DOC2AQ14183 400 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 INSL4Q14641 139 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 LDLRAD1Q5T700 205 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 NATD1Q8N6N6 113 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 FUBP3Q96I24 572 aaKnown RBP eCLIP19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 ASAH2Q9NR71 780 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 NPAP1Q9NZP6 1156 aa19.62■□□□□ 0.73
MAP1LC3B-206ENST00000564844 SSR3Q9UNL2 185 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms