RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 APOBEC3BQ9UH17 382 aaKnown RBP7.11□□□□□ -1.27
MAP1LC3B-205ENST00000564638 TAC3Q9UHF0 121 aa7.11□□□□□ -1.27
MAP1LC3B-205ENST00000564638 BTNL2Q9UIR0 455 aa7.11□□□□□ -1.27
MAP1LC3B-205ENST00000564638 PLAGL1Q9UM63 463 aa7.11□□□□□ -1.27
MAP1LC3B-205ENST00000564638 DOLKQ9UPQ8 538 aa7.11□□□□□ -1.27
MAP1LC3B-205ENST00000564638 SH2B3Q9UQQ2 575 aa7.11□□□□□ -1.27
MAP1LC3B-205ENST00000564638 PCDHB14Q9Y5E9 798 aa7.11□□□□□ -1.27
MAP1LC3B-205ENST00000564638 HEATR5BQ9P2D3 2071 aa7.11□□□□□ -1.27
MAP1LC3B-205ENST00000564638 HECTD1Q9ULT8 2610 aa7.11□□□□□ -1.27
MAP1LC3B-205ENST00000564638 NUP214P35658 2090 aaPredicted RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 RNF103-CHMP3A0A140T963 221 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 PRSS38A1L453 326 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 DPPA5A6NC42 116 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 C1QTNF9BB2RNN3 333 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CLOCKO15516 846 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 SH3BGRLO75368 114 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 PIAS2O75928 621 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 SEMA3DO95025 777 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 RASAL1O95294 804 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 TNFAIP8O95379 198 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CPSF4O95639 269 aaKnown RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 TNFP01375 233 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CSF2P04141 144 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 GSNP06396 782 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 PROS1P07225 676 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 C1QTNF9P0C862 333 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 ZNF883P0CG24 379 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 ZCCHC18P0CG32 403 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 LAMP1P11279 417 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CD59P13987 128 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 NME1P15531 152 aaKnown RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 ZNF23P17027 643 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CKMT2P17540 419 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 DDX5P17844 614 aaKnown RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 SDHBP21912 280 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 IDSP22304 550 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 PTPN6P29350 595 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 PKLRP30613 574 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CDKN2CP42773 168 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 RXRGP48443 463 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CCR8P51685 355 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 SRP54P61011 504 aaKnown RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 TXNL4AP83876 142 aaKnown RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 MEF2AQ02078 507 aaPredicted RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 INAVAQ3KP66 663 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CCDC157Q569K6 752 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 PRRT3Q5FWE3 981 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 ADNP2Q6IQ32 1131 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 KRT80Q6KB66 452 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 TMIGD1Q6UXZ0 262 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 IKBIPQ70UQ0 350 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CHST15Q7LFX5 561 aaPredicted RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 COMMD6Q7Z4G1 85 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 SPRED1Q7Z699 444 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 SERPINA11Q86U17 422 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 EPHX4Q8IUS5 362 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 NAXDQ8IW45 347 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 METTL4Q8N3J2 472 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CBR4Q8N4T8 237 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 EID2Q8N6I1 236 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 FBXO30Q8TB52 745 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 FAM110BQ8TC76 370 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 RHBDD1Q8TEB9 315 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 PPCDCQ96CD2 204 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 MTERF3Q96E29 417 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 C11orf24Q96F05 449 aaPredicted RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 AURKBQ96GD4 344 aaPredicted RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 VPS50Q96JG6 964 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 C12orf66Q96MD2 445 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CAMK1GQ96NX5 476 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 QRFPRQ96P65 431 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 OR2M4Q96R27 311 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 FERD3LQ96RJ6 166 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 MYCBPQ99417 103 aaPredicted RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CENPKQ9BS16 269 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CHID1Q9BWS9 393 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 FAM192AQ9GZU8 254 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 IKZF5Q9H5V7 419 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CXorf56Q9H5V9 222 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 REEP4Q9H6H4 257 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 MAGIXQ9H6Y5 334 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 MVB12BQ9H7P6 319 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 NT5DC2Q9H857 520 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 CARS2Q9HA77 564 aaKnown RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 FGF22Q9HCT0 170 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 GPR27Q9NS67 375 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 PNPLA3Q9NST1 481 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 OLAHQ9NV23 265 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 IMP3Q9NV31 184 aaKnown RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 UCKL1Q9NWZ5 548 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 AHSPQ9NZD4 102 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 SPASTQ9UBP0 616 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 ATP6V1HQ9UI12 483 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 KLF15Q9UIH9 416 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 ZMIZ1Q9ULJ6 1067 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 PNMA8BQ9ULN7 279 aaPredicted RBP7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 VPS4AQ9UN37 437 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 KCNK6Q9Y257 313 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 SLC17A4Q9Y2C5 497 aa7.1□□□□□ -1.27
MAP1LC3B-205ENST00000564638 BTBD3Q9Y2F9 522 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms