RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 CSF3RQ99062 836 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 MTERF1Q99551 399 aaKnown RBP7.32□□□□□ -1.24
ATXN3-249ENST00000564606 FEVQ99581 238 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 TCF25Q9BQ70 676 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 NEURL2Q9BR09 285 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 BBS2Q9BXC9 721 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 UCK2Q9BZX2 261 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 SLIRPQ9GZT3 109 aaKnown RBP7.32□□□□□ -1.24
ATXN3-249ENST00000564606 C6orf62Q9GZU0 229 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-249ENST00000564606 NXF2Q9GZY0 626 aaKnown RBP7.32□□□□□ -1.24
ATXN3-249ENST00000564606 ATG10Q9H0Y0 220 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 EVA1AQ9H8M9 152 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 CARS2Q9HA77 564 aaKnown RBP7.32□□□□□ -1.24
ATXN3-249ENST00000564606 A4GALTQ9NPC4 353 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 ISYNA1Q9NPH2 558 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 FKBP14Q9NWM8 211 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 RNF186Q9NXI6 227 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 MARK1Q9P0L2 795 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 SLC13A4Q9UKG4 626 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 TRAPPC4Q9Y296 219 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 GSTK1Q9Y2Q3 226 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 TDRKHQ9Y2W6 561 aaKnown RBP7.32□□□□□ -1.24
ATXN3-249ENST00000564606 RWDD3Q9Y3V2 267 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 TESMINQ9Y4I5 508 aa7.32□□□□□ -1.24
ATXN3-249ENST00000564606 MAGED1Q9Y5V3 778 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-249ENST00000564606 GSAPA4D1B5 854 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 ARHGEF33A8MVX0 844 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 E7EQ34 232 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 E9PQ18 207 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 K7ERQ8 282 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 HAT1O14929 419 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 MAGEB3O15480 346 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 PDPK1O15530 556 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 ADAM12O43184 909 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 DYRK3O43781 588 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 MITFO75030 526 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 TNFRSF21O75509 655 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 RFPL2O75678 378 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 DKK1O94907 266 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 SLITRK5O94991 958 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 PRAMEF12O95522 483 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 DLGAP3O95886 979 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 AGR2O95994 175 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 ADH1CP00326 375 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 FGBP02675 491 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 FUCA1P04066 466 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 HNRNPA1P09651 372 aaKnown RBP eCLIP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 FURINP09958 794 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 NR2F6P10588 404 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 CTSAP10619 480 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 ACADMP11310 421 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 OSMP13725 252 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 DRD2P14416 443 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 MYL12AP19105 171 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 TGM1P22735 817 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 TACR1P25103 407 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 PTBP1P26599 531 aaKnown RBP eCLIP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 CD70P32970 193 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 CA8P35219 290 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 IDUAP35475 653 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 SOAT1P35610 550 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 CDKN2CP42773 168 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 DGKGP49619 791 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 RGS6P49758 472 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 MAPK10P53779 464 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 CDH12P55289 794 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 RAB25P57735 213 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 B4GALNT1Q00973 533 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 UBE3AQ05086 875 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 DPTQ07507 201 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 ST3GAL4Q11206 333 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 ILKQ13418 452 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 AQP6Q13520 282 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 TP53BP2Q13625 1128 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 SLBPQ14493 270 aaKnown RBP eCLIP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 MLC1Q15049 377 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 SPDYE7PQ495Y7 208 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 PERM1Q5SV97 790 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 SLC25A30Q5SVS4 291 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 PLAG1Q6DJT9 500 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 DUS1LQ6P1R4 473 aaKnown RBP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 TMEM220Q6QAJ8 160 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 TMIGD1Q6UXZ0 262 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 HSDL2Q6YN16 418 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 SLCO4C1Q6ZQN7 724 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 TMPRSS11BQ86T26 416 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 TSPAN33Q86UF1 283 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 BPHLQ86WA6 291 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 C17orf64Q86WR6 236 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 RNF130Q86XS8 419 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 CCDC103Q8IW40 242 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 DCUN1D3Q8IWE4 304 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 SAMD14Q8IZD0 417 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-249ENST00000564606 HS3ST5Q8IZT8 346 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 MFSD4AQ8N468 514 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 TMIEQ8NEW7 156 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 HUS1BQ8NHY5 278 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 OR8D1Q8WZ84 308 aa7.31□□□□□ -1.24
ATXN3-249ENST00000564606 GGHQ92820 318 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms