RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 OR7G3Q8NG95 312 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 ACMSDQ8TDX5 336 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 ZNF473Q8WTR7 871 aaKnown RBP12.86□□□□□ -0.35
CNOT1-206ENST00000564557 WDR77Q9BQA1 342 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-206ENST00000564557 TBCDQ9BTW9 1192 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 TXLNGYQ9BZA5 131 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 NOL11Q9H8H0 719 aaKnown RBP12.86□□□□□ -0.35
CNOT1-206ENST00000564557 PPCSQ9HAB8 311 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 KCNK13Q9HB14 408 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 PRDM9Q9NQV7 894 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 PRTFDC1Q9NRG1 225 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 LANCL2Q9NS86 450 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 SCN2AQ99250 2005 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 FASNP49327 2511 aaKnown RBP12.86□□□□□ -0.35
CNOT1-206ENST00000564557 ZNF462Q96JM2 2506 aa12.86□□□□□ -0.35
CNOT1-206ENST00000564557 LRRC14BA6NHZ5 514 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 C3orf80F5H4A9 247 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 FAM227AF5H4B4 570 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 GOLGA8RI6L899 631 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 ZNF500O60304 480 aaPredicted RBP12.85□□□□□ -0.35
CNOT1-206ENST00000564557 DNAJB6O75190 326 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 VPS4BO75351 444 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 SLU7O95391 586 aaKnown RBP12.85□□□□□ -0.35
CNOT1-206ENST00000564557 MYBL2P10244 700 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 SSR2P43308 183 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 RAB38P57729 211 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 TAS2R50P59544 299 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 SLC13A2Q13183 592 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 MFAP5Q13361 173 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 ADPRMQ3LIE5 342 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 PLAG1Q6DJT9 500 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 ADNP2Q6IQ32 1131 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 VN1R5Q7Z5H4 357 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 HUS1BQ8NHY5 278 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 TSLPQ969D9 159 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 RGMAQ96B86 450 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 IMMP1LQ96LU5 166 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 MS4A8Q9BY19 250 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.85□□□□□ -0.351e-7■□□□□ 8.6
CNOT1-206ENST00000564557 CLMPQ9H6B4 373 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 ZBTB20Q9HC78 741 aaPredicted RBP12.85□□□□□ -0.35
CNOT1-206ENST00000564557 ABI3Q9P2A4 366 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 DCDC2Q9UHG0 476 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 VPS4AQ9UN37 437 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 MMACHCQ9Y4U1 282 aa12.85□□□□□ -0.35
CNOT1-206ENST00000564557 DOCK10Q96BY6 2186 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 SYNDIG1LA6NDD5 238 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 SMIM23A6NLE4 172 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 C4orf51C9J302 202 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 E2F3O00716 465 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 KALRNO60229 2985 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 ITGAMP11215 1152 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 PTX3P26022 381 aaPredicted RBP12.84□□□□□ -0.35
CNOT1-206ENST00000564557 CERS1P27544 350 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 GCAP28676 217 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 PIK3CBP42338 1070 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 BTG2P78543 158 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 ZNF33BQ06732 778 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 RUNX2Q13950 521 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 E2F2Q14209 437 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 TLR1Q15399 786 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 INPP5JQ15735 1006 aaPredicted RBP12.84□□□□□ -0.35
CNOT1-206ENST00000564557 IGFBP7Q16270 282 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 PLEKHN1Q494U1 663 aaPredicted RBP12.84□□□□□ -0.35
CNOT1-206ENST00000564557 KHDRBS2Q5VWX1 349 aaKnown RBP12.84□□□□□ -0.35
CNOT1-206ENST00000564557 MILR1Q7Z6M3 343 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 ZNF595Q8IYB9 648 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 SHISA5Q8N114 240 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 SUN3Q8TAQ9 357 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 M1APQ8TC57 530 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 WNT2BQ93097 391 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 ZNF354BQ96LW1 612 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 MTERF1Q99551 399 aaKnown RBP12.84□□□□□ -0.35
CNOT1-206ENST00000564557 SLC29A3Q9BZD2 475 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 AICDAQ9GZX7 198 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 OR51B5Q9H339 312 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 SEMA4BQ9NPR2 832 aaPredicted RBP12.84□□□□□ -0.35
CNOT1-206ENST00000564557 STMN3Q9NZ72 180 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 RNF11Q9Y3C5 154 aa12.84□□□□□ -0.35
CNOT1-206ENST00000564557 A8MUA0 341 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 H0YIV9 168 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 SAP18O00422 153 aaKnown RBP12.83□□□□□ -0.36
CNOT1-206ENST00000564557 SORBS2O94875 1100 aaKnown RBP12.83□□□□□ -0.36
CNOT1-206ENST00000564557 OTCP00480 354 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 CELA2AP08217 269 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 GSTA1P08263 222 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 MAOAP21397 527 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 SLCO1A2P46721 670 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 CCT5P48643 541 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 CD97P48960 835 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 EFNA3P52797 238 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 LIM2P55344 173 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 HSD17B7P56937 341 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 RPS13P62277 151 aaKnown RBP12.83□□□□□ -0.36
CNOT1-206ENST00000564557 STX4Q12846 297 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 IFT88Q13099 833 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 ZNF169Q14929 603 aaPredicted RBP12.83□□□□□ -0.36
CNOT1-206ENST00000564557 ZRSR2Q15696 482 aaKnown RBP12.83□□□□□ -0.36
CNOT1-206ENST00000564557 DEPDC1Q5TB30 811 aa12.83□□□□□ -0.36
CNOT1-206ENST00000564557 OR4C11Q6IEV9 310 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms