RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	HRG	P04196	525 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	HSF5	Q4G112	596 aa	Predicted RBP	4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	CERK	Q8TCT0	537 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	HRASLS5	Q96KN8	279 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	AIF1L	Q9BQI0	150 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	HDHD5	Q9BXW7	423 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	SEC14L3	Q9UDX4	400 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	LAT	O43561	262 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	GLUD1	P00367	558 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	SCG5	P05408	212 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	SERPINA13P	Q6UXR4	307 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	ACSL6	Q9UKU0	697 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	NPIPA7	E9PJI5	369 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	NPIPA8	P0DM63	369 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	TAF1A	Q15573	450 aa	Predicted RBP	4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	SSX6	Q7RTT6	188 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	TXNRD3	Q86VQ6	643 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	EIF4E3	Q8N5X7	224 aa	Known RBP	4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	ZBTB44	Q8NCP5	570 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	B3GALNT2	Q8NCR0	500 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF514	Q96K75	400 aa	Predicted RBP	4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	TKTL2	Q9H0I9	626 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	MGAT4C	Q9UBM8	478 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	DIMT1	Q9UNQ2	313 aa	Known RBP	4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	PCDHB14	Q9Y5E9	798 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	RGPD1	P0DJD0	1748 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	IFNGR1	P15260	489 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	GAL	P22466	123 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	XK	P51811	444 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	HCCS	P53701	268 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	MANF	P55145	182 aa	Known RBP	4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	FAM209A	Q5JX71	171 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	ESRP1	Q6NXG1	681 aa	Known RBP	4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	DOK6	Q6PKX4	331 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	ENPP7	Q6UWV6	458 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	LRRC28	Q86X40	367 aa	Predicted RBP	4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	SORT1	Q99523	831 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	SCAMP3	O14828	347 aa	Known RBP	4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	SCAF4	O95104	1147 aa	Known RBP	4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	IFNA21	P01568	189 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	FGB	P02675	491 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	NAGA	P17050	411 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	CR2	P20023	1033 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	MAOA	P21397	527 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	NFKB2	Q00653	900 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	POU4F2	Q12837	409 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF177	Q13360	481 aa	Predicted RBP	4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	RAB41	Q5JT25	222 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	SHE	Q5VZ18	495 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	GNPDA2	Q8TDQ7	276 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	TPT1P8	Q9HAU6	139 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	LYRM2	Q9NU23	88 aa	Predicted RBP	4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	UGT2B7	P16662	529 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	HIST2H3A	Q71DI3	136 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	GPR149	Q86SP6	731 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	SLC9B2	Q86UD5	537 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	ANGPT4	Q9Y264	503 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	PRELID3B	Q9Y3B1	194 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	AHCTF1	Q8WYP5	2266 aa		4.11	□□□□□ -1.75
MACF1-231	ENST00000564288	GNG14	A0A1W2PPG7	69 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	TXNL1	O43396	289 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	IL1R2	P27930	398 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	FCGRT	P55899	365 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	GBE1	Q04446	702 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	FUZ	Q9BT04	418 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	ELAC1	Q9H777	363 aa	Known RBP	4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	SEMA3G	Q9NS98	782 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	DAPL1	A0PJW8	107 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	OR2F2	O95006	317 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	CLCN3	P51790	818 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	CRISP1	P54107	249 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	OR2F1	Q13607	317 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	PRPF38B	Q5VTL8	546 aa	Known RBP	4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	TMEM205	Q6UW68	189 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	NAA40	Q86UY6	237 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	USP7	Q93009	1102 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	ENAM	Q9NRM1	1142 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	TMEM218	A2RU14	115 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	B4GALT5	O43286	388 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	UGDH	O60701	494 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	GUCA2B	Q16661	112 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	RAD51AP1	Q96B01	352 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288		A0A1W2PQ09	198 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	NR2F1	P10589	423 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	PKM	P14618	531 aa	Known RBP	4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	CLK2	P49760	499 aa	Known RBP	4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	ZRANB3	Q5FWF4	1079 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	UBAP2	Q5T6F2	1119 aa	Known RBP	4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	WASH2P	Q6VEQ5	465 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF730	Q6ZMV8	503 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	CFAP77	Q6ZQR2	320 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	COPS5	Q92905	334 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	C1QTNF7	Q9BXJ2	289 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	TVP23B	Q9NYZ1	205 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	CACNG2	Q9Y698	323 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	LAMB4	A4D0S4	1761 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	CLIC3	O95833	236 aa		4.1	□□□□□ -1.75
MACF1-231	ENST00000564288	CLCNKA	P51800	687 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms