RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 VASH2Q86V25 355 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 GPR180Q86V85 440 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 METTL4Q8N3J2 472 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 ARL14Q8N4G2 192 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 C1orf52Q8N6N3 182 aaKnown RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 NATD1Q8N6N6 113 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 RCBTB1Q8NDN9 531 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 SRFBP1Q8NEF9 429 aaKnown RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 VPS37AQ8NEZ2 397 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 ZDHHC1Q8WTX9 485 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 CHTF18Q8WVB6 975 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 LRRC58Q96CX6 371 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 ASB9Q96DX5 294 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 MTERF3Q96E29 417 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 C11orf24Q96F05 449 aaPredicted RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 APIPQ96GX9 242 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 ACTL8Q9H568 366 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 DENND2DQ9H6A0 471 aaPredicted RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 SLC52A3Q9NQ40 469 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 THSD1Q9NS62 852 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 ATAD3AQ9NVI7 634 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 SCHIP1Q9P0W5 487 aaPredicted RBP9.29□□□□□ -0.92
UBFD1-203ENST00000564106 LRIT1Q9P2V4 623 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 ABCD2Q9UBJ2 740 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 CPNE7Q9UBL6 633 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 MCM8Q9UJA3 840 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 SH2B3Q9UQQ2 575 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 POMPQ9Y244 141 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 DLGAP4Q9Y2H0 992 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 L3MBTL1Q9Y468 752 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 LOXL2Q9Y4K0 774 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 PCDHGA7Q9Y5G6 932 aa9.29□□□□□ -0.92
UBFD1-203ENST00000564106 FLNBO75369 2602 aaKnown RBP9.28□□□□□ -0.92
UBFD1-203ENST00000564106 ARHGAP10A1A4S6 786 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 H7BY64 318 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 OR1F1O43749 312 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 ERN1O75460 977 aaKnown RBP9.28□□□□□ -0.92
UBFD1-203ENST00000564106 GLB1P16278 677 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 PSMB5P28074 263 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 CD1CP29017 333 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 CCKBRP32239 447 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 S100A3P33764 101 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 KIR3DL1P43629 444 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 ZFP36L2P47974 494 aaKnown RBP9.28□□□□□ -0.92
UBFD1-203ENST00000564106 FASLGP48023 281 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 RPS15AP62244 130 aaKnown RBP9.28□□□□□ -0.92
UBFD1-203ENST00000564106 AP2B1P63010 937 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 CSNK1G2P78368 415 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 HHEXQ03014 270 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 RELAQ04206 551 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 TGM3Q08188 693 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 TRAP1Q12931 704 aaKnown RBP9.28□□□□□ -0.92
UBFD1-203ENST00000564106 PWP1Q13610 501 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 MAP7Q14244 749 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 FLOT2Q14254 428 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 GPR18Q14330 331 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 KPNB1Q14974 876 aaKnown RBP9.28□□□□□ -0.92
UBFD1-203ENST00000564106 NR1D2Q14995 579 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 SLC5A12Q1EHB4 618 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 AMZ1Q400G9 498 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 DEPDC1Q5TB30 811 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 ANXA8L1Q5VT79 327 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 FAM219BQ5XKK7 198 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 AAGABQ6PD74 315 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 RIPOR1Q6ZS17 1223 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 COMMD6Q7Z4G1 85 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 CAMKMTQ7Z624 323 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 RETREG3Q86VR2 466 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 OOSP2Q86WS3 158 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 NUDT13Q86X67 352 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.28□□□□□ -0.92
UBFD1-203ENST00000564106 TMEM132CQ8N3T6 1108 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 C2orf73Q8N5S3 287 aaPredicted RBP9.28□□□□□ -0.92
UBFD1-203ENST00000564106 TNIP2Q8NFZ5 429 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 OR4E2Q8NGC2 313 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 OR8J3Q8NGG0 315 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 OR8J2Q8NGG1 315 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 JPH3Q8WXH2 748 aaPredicted RBP9.28□□□□□ -0.92
UBFD1-203ENST00000564106 VPS33AQ96AX1 596 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 RGMAQ96B86 450 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 CCDC124Q96CT7 223 aaKnown RBP9.28□□□□□ -0.92
UBFD1-203ENST00000564106 THAP11Q96EK4 314 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 ITCHQ96J02 903 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 TEX37Q96LM6 180 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 PRAP1Q96NZ9 151 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 TSSK3Q96PN8 268 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 OR52E6Q96RD3 313 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 GPATCH1Q9BRR8 931 aaKnown RBP9.28□□□□□ -0.92
UBFD1-203ENST00000564106 DPH7Q9BTV6 452 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 MS4A8Q9BY19 250 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 TRIM15Q9C019 465 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 TWSG1Q9GZX9 223 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 XKR8Q9H6D3 395 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 UCK1Q9HA47 277 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 RNPEPL1Q9HAU8 725 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 MYNNQ9NPC7 610 aa9.28□□□□□ -0.92
UBFD1-203ENST00000564106 CUEDC1Q9NWM3 386 aaPredicted RBP9.28□□□□□ -0.92
UBFD1-203ENST00000564106 FAM120CQ9NX05 1096 aaKnown RBP9.28□□□□□ -0.92
UBFD1-203ENST00000564106 TMEM181Q9P2C4 612 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms